Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g438450 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-49 198.4 96 100.0
Medtr7g063280 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-25 119.0 93 57.0
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 1.4e-18 96.3 93 45.2
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-18 95.1 81 55.6
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-16 89.0 65 64.6
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-16 88.2 67 61.2
TPR.G18407 Trifolium pratense HOM05D000147 ORTHO05D004093 6.4e-16 87.4 69 60.9
Medtr1g045560 Medicago truncatula HOM05D000147 ORTHO05D004093 7.1e-15 84.0 87 48.3
Medtr8g088220 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-14 83.2 77 46.8
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 2.7e-14 82.0 93 41.9
Medtr3g465840 Medicago truncatula HOM05D000826 ORTHO05D001831 4.6e-14 81.3 66 59.1
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 7.8e-14 80.5 83 43.4
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 1.3e-13 79.7 60 63.3
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 1.7e-13 79.3 67 56.7
Medtr0002s1220 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-13 79.0 88 44.3
Medtr5g083200 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-13 79.0 88 44.3
Medtr7g072030 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-13 79.0 53 67.9
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 3.9e-13 78.2 56 64.3
Medtr1g045340 Medicago truncatula HOM05D000147 ORTHO05D004093 6.6e-13 77.4 88 43.2
Medtr1g070820 Medicago truncatula HOM05D000147 ORTHO05D004093 6.6e-13 77.4 88 43.2
Medtr3g111390 Medicago truncatula HOM05D000147 ORTHO05D004093 6.6e-13 77.4 88 43.2
Medtr5g075610 Medicago truncatula HOM05D000147 ORTHO05D004093 8.6e-13 77.0 95 44.2
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 8.6e-13 77.0 86 47.7
Medtr1g074090 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-12 75.1 58 58.6
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-12 75.1 81 44.4
Medtr8g098925 Medicago truncatula HOM05D000147 ORTHO05D004093 9.6e-12 73.6 90 41.1
Medtr1g069475 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-11 73.2 72 47.2
Medtr2g027020 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-11 73.2 93 38.7
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-11 73.2 71 49.3
Medtr4g029360 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-11 72.4 92 42.4
Medtr3g026270 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-11 72.0 54 57.4
Medtr6g013970 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-11 71.6 67 46.3
Medtr6g016135 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-11 71.6 56 58.9
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 6.2e-11 70.9 85 42.4
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-09 66.6 85 36.5
Medtr6g089560 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-09 66.6 77 36.4
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-09 65.9 75 42.7
Medtr5g091440 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-09 65.1 90 38.9
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 3.4e-09 65.1 93 35.5
Medtr2g059470 Medicago truncatula HOM05D000147 ORTHO05D004093 5.8e-09 64.3 76 42.1
Medtr7g006470 Medicago truncatula HOM05D000147 ORTHO05D004093 5.8e-09 64.3 78 39.7
Medtr4g036855 Medicago truncatula HOM05D000147 ORTHO05D004093 7.6e-09 63.9 80 38.8
Medtr0093s0070 Medicago truncatula HOM05D000147 ORTHO05D004093 9.9e-09 63.5 75 40.0
Medtr6g034915 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-08 63.2 67 43.3
Medtr6g045427 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-08 63.2 63 41.3
Medtr7g013520 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-08 63.2 67 43.3
Medtr5g034450 Medicago truncatula HOM05D000147 ORTHO05D004093 3.8e-08 61.6 58 46.6
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 4.9e-08 61.2 53 54.7
Medtr1g062840 Medicago truncatula HOM05D000147 ORTHO05D004093 4.9e-08 61.2 74 39.2
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 4.9e-08 61.2 57 50.9
Medtr1g034430 Medicago truncatula HOM05D000147 ORTHO05D004093 6.4e-08 60.8 78 38.5
Medtr5g069700 Medicago truncatula HOM05D000147 ORTHO05D004093 8.4e-08 60.5 70 42.9
Medtr8g059135 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-07 60.1 58 50.0
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 2.4e-07 58.9 74 41.9
Medtr4g008270 Medicago truncatula HOM05D000147 ORTHO05D004093 3.2e-07 58.5 67 40.3
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 4.2e-07 58.2 78 38.5
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 5.4e-07 57.8 72 40.3
Medtr1g017820 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-06 56.6 52 46.2
Medtr1g017840 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-06 56.6 66 42.4
Psat6g221120 Pisum sativum HOM05D000147 ORTHO05D004093 1.6e-06 56.2 92 33.7
Medtr2g047100 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-06 55.1 92 33.7
Medtr8g022750 Medicago truncatula HOM05D000147 ORTHO05D004093 4.6e-06 54.7 69 36.2
Medtr5g014420 Medicago truncatula HOM05D000147 ORTHO05D004093 6.0e-06 54.3 44 50.0


User provided reference genes

Program Settings