Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g436990 Medicago truncatula HOM05D007997 ORTHO05D010171 5.1e-204 714.1 353 100.0
Medtr2g436970 Medicago truncatula HOM05D001646 ORTHO05D001572 5.0e-90 335.5 302 64.6
Medtr7g091670 Medicago truncatula HOM05D007997 ORTHO05D010171 5.4e-36 156.0 80 88.8
Medtr7g060475 Medicago truncatula HOM05D007997 ORTHO05D010171 1.2e-35 154.8 105 69.5
Medtr5g023580 Medicago truncatula HOM05D000192 ORTHO05D000123 2.1e-32 144.1 75 88.0
Medtr5g060880 Medicago truncatula HOM05D002421 ORTHO05D002560 1.8e-31 141.0 75 85.3
Medtr5g460870 Medicago truncatula HOM05D002421 ORTHO05D002560 1.3e-29 134.8 72 84.7
Medtr1g060110 Medicago truncatula HOM05D007997 ORTHO05D010171 8.3e-29 132.1 84 72.6
Medtr6g087100 Medicago truncatula HOM05D007997 ORTHO05D010171 7.8e-27 125.6 63 90.5
Medtr3g014560 Medicago truncatula HOM05D007997 ORTHO05D010171 1.0e-26 125.2 64 89.1
Medtr3g116670 Medicago truncatula HOM05D007997 ORTHO05D010171 3.9e-26 123.2 71 81.7
Medtr7g087455 Medicago truncatula HOM05D007997 ORTHO05D010171 1.1e-25 121.7 67 82.1
Medtr4g019720 Medicago truncatula HOM05D007997 ORTHO05D010171 3.6e-24 116.7 64 84.4
Medtr0048s0210 Medicago truncatula HOM05D007997 ORTHO05D010171 2.3e-23 114.0 70 80.0
Medtr7g071670 Medicago truncatula HOM05D007997 ORTHO05D010171 8.9e-23 112.1 67 77.6
Medtr8g097110 Medicago truncatula HOM05D007997 ORTHO05D010171 1.5e-22 111.3 63 81.0
TPR.G26816 Trifolium pratense HOM05D001646 ORTHO05D010171 7.5e-22 109.0 215 38.6
TPR.G31085 Trifolium pratense HOM05D019132 ORTHO05D010171 7.5e-22 109.0 224 37.5
Psat1g153200 Pisum sativum HOM05D001646 ORTHO05D001572 4.1e-20 103.2 247 40.1
TPR.G31087 Trifolium pratense HOM05D019132 ORTHO05D010171 4.1e-20 103.2 215 37.2
Medtr6g033730 Medicago truncatula HOM05D007997 ORTHO05D010171 2.7e-19 100.5 57 80.7
Medtr7g014980 Medicago truncatula HOM05D007997 ORTHO05D010171 1.7e-18 97.8 57 78.9
Medtr3g449780 Medicago truncatula HOM05D007997 ORTHO05D010171 1.5e-17 94.7 71 70.4
Medtr1g015880 Medicago truncatula HOM05D007997 ORTHO05D010171 2.1e-16 90.9 67 64.2
Medtr4g018910 Medicago truncatula HOM05D000053 ORTHO05D000448 6.2e-16 89.4 56 75.0
Medtr8g028900 Medicago truncatula HOM05D007997 ORTHO05D010171 6.2e-16 89.4 53 75.5
Medtr7g070905 Medicago truncatula HOM05D007997 ORTHO05D010171 1.8e-15 87.8 44 90.9
Medtr2g037883 Medicago truncatula HOM05D007997 ORTHO05D010171 1.5e-14 84.7 39 97.4
Medtr6g022030 Medicago truncatula HOM05D007997 ORTHO05D010171 1.5e-14 84.7 56 71.4
Medtr3g050670 Medicago truncatula HOM05D007997 ORTHO05D010171 5.8e-14 82.8 39 92.3
Medtr6g074890 Medicago truncatula HOM05D007997 ORTHO05D010171 7.6e-14 82.4 60 65.0
Medtr8g032140 Medicago truncatula HOM05D001646 ORTHO05D010171 9.9e-14 82.0 49 77.6
Medtr7g069535 Medicago truncatula HOM05D007997 ORTHO05D010171 1.3e-13 81.6 38 94.7
Medtr5g059000 Medicago truncatula HOM05D007997 ORTHO05D010171 1.7e-13 81.3 49 75.5
Medtr5g018530 Medicago truncatula HOM05D007997 ORTHO05D010171 1.4e-12 78.2 38 86.8
Medtr5g038930 Medicago truncatula HOM05D007997 ORTHO05D010171 1.4e-12 78.2 43 83.7
Medtr8g073295 Medicago truncatula HOM05D007997 ORTHO05D010171 1.9e-12 77.8 44 77.3
Medtr2g094140 Medicago truncatula HOM05D007997 ORTHO05D010171 2.4e-12 77.4 38 89.5
Medtr0519s0010 Medicago truncatula HOM05D007997 ORTHO05D010171 4.1e-12 76.6 34 97.1
Medtr8g028285 Medicago truncatula HOM05D007997 ORTHO05D010171 5.4e-12 76.3 48 72.9
TPR.G36370 Trifolium pratense HOM05D019132 ORTHO05D010171 5.4e-12 76.3 109 49.5
Medtr5g077110 Medicago truncatula HOM05D007997 ORTHO05D010171 7.1e-12 75.9 38 86.8
Medtr2g086380 Medicago truncatula HOM05D007997 ORTHO05D010171 1.2e-11 75.1 44 75.0
TPR.G36373 Trifolium pratense HOM05D019132 ORTHO05D010171 1.2e-11 75.1 148 39.2
Medtr1g046240 Medicago truncatula HOM05D007997 ORTHO05D010171 2.1e-11 74.3 41 80.5
Medtr8g011575 Medicago truncatula HOM05D007997 ORTHO05D010171 2.1e-11 74.3 37 83.8
Medtr4g129250 Medicago truncatula HOM05D007997 ORTHO05D010171 6.0e-11 72.8 39 82.1
Medtr6g016695 Medicago truncatula HOM05D007997 ORTHO05D010171 6.0e-11 72.8 40 80.0
Medtr8g040390 Medicago truncatula HOM05D007997 ORTHO05D010171 6.0e-11 72.8 39 84.6
Medtr4g016070 Medicago truncatula HOM05D007997 ORTHO05D010171 1.0e-10 72.0 42 76.2
Medtr4g073060 Medicago truncatula HOM05D043031 ORTHO05D010171 1.0e-10 72.0 82 48.8
Medtr2g079770 Medicago truncatula HOM05D007997 ORTHO05D010171 1.3e-10 71.6 37 83.8
Medtr7g087760 Medicago truncatula HOM05D002024 ORTHO05D010171 2.3e-10 70.9 59 57.6
Medtr7g109650 Medicago truncatula HOM05D007997 ORTHO05D010171 2.3e-10 70.9 41 78.0
TPR.G645 Trifolium pratense HOM05D019132 ORTHO05D010171 2.3e-10 70.9 122 45.1
Medtr6g012710 Medicago truncatula HOM05D007997 ORTHO05D010171 3.0e-10 70.5 68 55.9
Medtr7g093150 Medicago truncatula HOM05D007997 ORTHO05D010171 1.1e-09 68.6 47 72.3
Medtr2g089460 Medicago truncatula HOM05D007997 ORTHO05D010171 1.5e-09 68.2 33 90.9
Medtr7g101000 Medicago truncatula HOM05D007997 ORTHO05D010171 1.9e-09 67.8 39 79.5
Medtr4g005850 Medicago truncatula HOM05D007997 ORTHO05D010171 2.5e-09 67.4 83 48.2
Medtr4g098770 Medicago truncatula HOM05D007997 ORTHO05D010171 2.5e-09 67.4 33 87.9
Medtr7g010130 Medicago truncatula HOM05D007997 ORTHO05D010171 2.5e-09 67.4 37 81.1
Medtr1g015900 Medicago truncatula HOM05D007997 ORTHO05D010171 3.3e-09 67.0 39 82.1
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 4.3e-09 66.6 67 53.7
Medtr4g028100 Medicago truncatula HOM05D007997 ORTHO05D010171 1.2e-08 65.1 38 78.9
Medtr1g108730 Medicago truncatula HOM05D007997 ORTHO05D010171 1.6e-08 64.7 39 71.8
Medtr8g021360 Medicago truncatula HOM05D007997 ORTHO05D010171 1.6e-08 64.7 34 82.4
Medtr5g021110 Medicago truncatula HOM05D007997 ORTHO05D010171 3.6e-08 63.5 39 76.9
SabraMtG0006000 Salix brachista HOM05D012647 ORTHO05D014727 6.2e-08 62.8 30 93.3
Medtr6g486155 Medicago truncatula HOM05D007997 ORTHO05D010171 1.8e-07 61.2 49 61.2
TPR.G31084 Trifolium pratense HOM05D019132 ORTHO05D010171 1.8e-07 61.2 87 48.3
arahy.Tifrunner.gnm1.ann1.C1HSPJ Arachis hypogaea HOM05D015035 ORTHO05D010933 3.1e-07 60.5 30 90.0
SGA_v2.0_scaffold592G53090 Striga asiatica HOM05D008931 ORTHO05D010171 3.1e-07 60.5 30 90.0
TPR.G31086 Trifolium pratense HOM05D019132 ORTHO05D010171 3.1e-07 60.5 80 50.0
SHI37615 Sapria himalayana HOM05D008931 ORTHO05D010933 5.2e-07 59.7 39 71.8
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.0e-07 58.9 201 28.9
Medtr5g063070 Medicago truncatula HOM05D007997 ORTHO05D010171 1.2e-06 58.5 30 83.3
Medtr8g467810 Medicago truncatula HOM05D007997 ORTHO05D010171 1.2e-06 58.5 26 100.0
Medtr3g463480 Medicago truncatula HOM05D007997 ORTHO05D010171 2.0e-06 57.8 35 68.6
Medtr2g019025 Medicago truncatula HOM05D007997 ORTHO05D010171 2.6e-06 57.4 34 82.4
SHI36399 Sapria himalayana HOM05D008931 ORTHO05D010933 2.6e-06 57.4 28 89.3
Medtr6g029435 Medicago truncatula HOM05D007997 ORTHO05D010171 3.4e-06 57.0 36 72.2
Medtr7g081640 Medicago truncatula HOM05D007997 ORTHO05D010171 4.4e-06 56.6 38 68.4
Medtr8g089060 Medicago truncatula HOM05D007997 ORTHO05D010171 4.4e-06 56.6 36 75.0
Sed0020393 Sechium edule HOM05D001646 ORTHO05D001572 9.9e-06 55.5 50 58.0


User provided reference genes

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