Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 2.8e-45 184.9 90 100.0
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 4.7e-37 157.5 88 86.4
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 6.2e-37 157.1 88 83.0
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 8.9e-36 153.3 90 81.1
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 5.2e-28 127.5 85 70.6
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 3.4e-27 124.8 82 69.5
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 4.4e-27 124.4 83 73.5
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 5.8e-27 124.0 78 71.8
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 9.9e-27 123.2 79 69.6
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 9.9e-27 123.2 79 69.6
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 1.3e-26 122.9 80 71.2
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 2.2e-26 122.1 78 70.5
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 3.7e-26 121.3 82 69.5
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 1.1e-25 119.8 79 68.4
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.4e-25 119.4 85 64.7
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.4e-25 119.4 77 71.4
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 1.9e-25 119.0 81 61.7
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 2.4e-25 118.6 78 69.2
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 2.4e-25 118.6 88 60.2
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 4.1e-25 117.9 85 63.5
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 5.4e-25 117.5 81 60.5
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 7.1e-25 117.1 78 67.9
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 7.1e-25 117.1 82 67.1
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 9.2e-25 116.7 80 66.2
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 9.2e-25 116.7 78 67.9
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 9.2e-25 116.7 85 63.5
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 1.6e-24 115.9 80 66.2
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 2.7e-24 115.2 89 55.1
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 2.7e-24 115.2 78 65.4
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 2.7e-24 115.2 78 65.4
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 4.6e-24 114.4 82 63.4
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 6.0e-24 114.0 79 64.6
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 7.8e-24 113.6 85 61.2
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 1.3e-23 112.8 78 66.7
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 1.3e-23 112.8 80 62.5
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 1.7e-23 112.5 73 71.2
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 1.7e-23 112.5 80 62.5
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 2.3e-23 112.1 78 64.1
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 3.0e-23 111.7 79 62.0
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 3.9e-23 111.3 78 64.1
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 3.9e-23 111.3 78 64.1
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 3.9e-23 111.3 78 64.1
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 6.6e-23 110.5 78 64.1
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 6.6e-23 110.5 78 64.1
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 6.6e-23 110.5 80 63.8
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 8.6e-23 110.2 86 59.3
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 8.6e-23 110.2 89 51.7
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 8.6e-23 110.2 78 64.1
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 1.1e-22 109.8 78 64.1
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 1.5e-22 109.4 77 64.9
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 1.5e-22 109.4 77 63.6
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 1.9e-22 109.0 80 62.5
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 3.3e-22 108.2 80 62.5
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 7.3e-22 107.1 83 59.0
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 7.3e-22 107.1 91 56.0
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 9.5e-22 106.7 78 65.4
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 9.5e-22 106.7 77 63.6
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 1.2e-21 106.3 77 62.3
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 1.6e-21 105.9 91 54.9
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 2.8e-21 105.1 78 64.1
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 1.1e-20 103.2 73 65.8
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 3.1e-20 101.7 81 60.5
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 5.2e-20 100.9 83 62.7
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 1.2e-19 99.8 81 54.3
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 4.4e-19 97.8 83 57.8
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 7.6e-19 97.1 83 55.4
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 8.4e-18 93.6 71 62.0
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 1.1e-17 93.2 83 54.2
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 2.4e-17 92.0 83 53.0
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 4.2e-17 91.3 79 57.0
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.3e-15 86.3 60 65.0
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 3.4e-11 71.6 74 44.6
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 9.9e-11 70.1 49 59.2
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 2.2e-10 68.9 48 58.3
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 2.9e-10 68.6 84 41.7
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 1.9e-09 65.9 76 43.4
SEGI_25488 Sequoiadendron giganteum HOM05D007940 ORTHO05D010046 2.7e-08 62.0 64 43.8


User provided reference genes

Program Settings