Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 1.1e-80 303.1 148 100.0
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 1.3e-79 299.7 148 98.0
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 6.9e-78 293.9 148 96.6
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 6.9e-78 293.9 148 96.6
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 2.0e-77 292.4 148 95.9
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 2.0e-77 292.4 148 95.9
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 2.6e-77 292.0 148 95.3
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 2.9e-76 288.5 148 95.3
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 3.8e-76 288.1 148 94.6
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 5.0e-76 287.7 148 94.6
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 6.5e-76 287.3 148 92.6
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 3.2e-75 285.0 148 92.6
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 7.2e-75 283.9 148 92.6
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 7.2e-75 283.9 148 92.6
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 9.4e-75 283.5 147 91.8
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 2.1e-74 282.3 148 91.9
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 2.7e-74 282.0 148 91.9
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 3.6e-74 281.6 148 92.6
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 4.7e-74 281.2 148 91.9
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 1.0e-73 280.0 148 89.9
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 89.2
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 5.1e-73 277.7 148 87.8
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 87.2
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 1.5e-72 276.2 146 89.0
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 1.5e-72 276.2 148 88.5
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 88.5
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 87.2
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 87.8
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 89.2
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 88.5
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 5.7e-72 274.2 146 89.7
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 5.7e-72 274.2 148 87.8
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 7.4e-72 273.9 146 90.4
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 1.3e-71 273.1 148 87.8
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 2.2e-71 272.3 148 85.8
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 2.2e-71 272.3 148 87.2
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 2.2e-71 272.3 148 88.5
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 2.8e-71 271.9 168 81.5
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 86.5
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 3.7e-71 271.6 148 88.5
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 3.7e-71 271.6 148 88.5
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 6.3e-71 270.8 148 87.8
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 6.3e-71 270.8 148 87.2
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 6.3e-71 270.8 148 87.2
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 8.2e-71 270.4 148 86.5
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 87.8
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 1.1e-70 270.0 147 86.4
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 87.2
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 86.5
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 85.8
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 85.8
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 85.8
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.4e-70 269.6 148 87.8
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 1.8e-70 269.2 148 85.8
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 1.8e-70 269.2 148 86.5
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 2.4e-70 268.9 148 85.8
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 3.1e-70 268.5 146 87.0
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 3.1e-70 268.5 146 87.0
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 3.1e-70 268.5 146 86.3
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 3.1e-70 268.5 148 85.8
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 3.1e-70 268.5 146 84.9
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 6.9e-70 267.3 148 85.1
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 9.1e-70 266.9 146 86.3
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 1.2e-69 266.5 148 85.8
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.8
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 2.0e-69 265.8 146 84.2
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 2.0e-69 265.8 148 85.1
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 2.6e-69 265.4 146 85.6
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 3.4e-69 265.0 146 85.6
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 4.5e-69 264.6 148 85.1
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 4.5e-69 264.6 148 85.1
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 85.1
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 85.1
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 1.0e-68 263.5 148 84.5
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 1.3e-68 263.1 148 83.1
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.7e-68 262.7 148 83.8
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 2.2e-68 262.3 148 84.5
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 2.2e-68 262.3 148 83.8
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 6.5e-68 260.8 146 83.6
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 1.1e-67 260.0 130 94.6
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 1.4e-67 259.6 148 83.1
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 1.9e-67 259.2 146 83.6
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 2.5e-67 258.8 148 81.8
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 2.5e-67 258.8 147 81.6
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 7.2e-67 257.3 148 81.8
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 6.1e-66 254.2 139 86.3
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 8.8e-65 250.4 148 79.7
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 2.0e-64 249.2 148 77.0
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 3.3e-64 248.4 140 82.9
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 5.7e-64 247.7 158 75.3
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 1.7e-63 246.1 133 87.2
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 2.2e-63 245.7 131 91.6
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 2.2e-63 245.7 131 91.6
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 9.1e-62 240.4 135 83.0
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.0e-61 239.2 144 77.1
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 1.3e-60 236.5 148 75.7
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 1.3e-60 236.5 129 85.3
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.3e-60 236.5 144 75.7
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 5.0e-60 234.6 198 61.1
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.2e-59 231.9 123 88.6
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 2.1e-58 229.2 124 86.3
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 4.7e-58 228.0 146 73.3
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 4.7e-58 228.0 124 88.7
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 6.7e-57 224.2 146 71.2
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 8.8e-57 223.8 124 83.9
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.5e-56 223.0 122 88.5
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 2.0e-56 222.6 130 83.8
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 3.3e-56 221.9 124 83.1
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.8e-54 216.1 130 78.5
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 9.1e-54 213.8 130 75.4
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 3.5e-53 211.8 124 79.0
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 4.5e-53 211.5 146 65.8
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 1.3e-52 209.9 121 81.0
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 5.5e-51 204.5 148 68.2
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 2.1e-50 202.6 145 65.5
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.7e-47 193.0 118 77.1
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 4.8e-47 191.4 146 57.5
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 2.9e-44 182.2 113 78.8
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 7.2e-43 177.6 148 63.5
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.0e-41 173.7 148 62.8
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 2.6e-40 169.1 148 60.8
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 6.3e-39 164.5 143 54.5
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 1.4e-38 163.3 119 69.7
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.1e-38 162.2 119 67.2
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 5.6e-35 151.4 176 50.0
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 6.1e-34 147.9 84 82.1
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 1.4e-33 146.7 82 86.6
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.3e-31 140.2 89 77.5
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 6.8e-25 117.9 86 65.1
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 4.1e-22 108.6 58 86.2
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.1e-21 106.3 65 81.5
Nn8g39461 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.7e-20 103.2 63 76.2
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.5e-19 99.4 128 48.4
Hund04518 Selenicereus undatus HOM05D004884 ORTHO05D005873 5.6e-19 98.2 60 75.0
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.3e-19 97.8 63 73.0
TPR.G29435 Trifolium pratense HOM05D004884 ORTHO05D005873 4.7e-18 95.1 46 97.8
MCO11G456 Micromonas commoda HOM05D004884 ORTHO05D005873 6.2e-18 94.7 152 36.2
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.5e-16 87.8 50 82.0
Cre12.g561200 Chlamydomonas reinhardtii HOM05D004884 ORTHO05D005873 9.9e-16 87.4 140 35.0
PRCOL_00001860 Prasinoderma coloniale HOM05D004884 ORTHO05D005873 1.4e-14 83.6 127 37.0
CAN.G185.10 Capsicum annuum HOM05D004884 ORTHO05D005873 1.2e-08 63.9 63 55.6


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