Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g102760 Medicago truncatula HOM05D001629 ORTHO05D003842 3.0e-38 161.4 82 100.0
Medtr2g102800 Medicago truncatula HOM05D001629 ORTHO05D003842 4.6e-15 84.3 80 62.5
Ca_01093_v3 Cicer arietinum L. HOM05D001629 ORTHO05D003842 1.3e-14 82.8 80 61.2
Psat0s2701g0040 Pisum sativum HOM05D001629 ORTHO05D003842 1.8e-14 82.4 80 62.5
VMungo1080G0185 Vigna mungo HOM05D001629 ORTHO05D003842 1.9e-13 79.0 80 58.8
Lalb_Chr14g0373601 Lupinus albus HOM05D001629 ORTHO05D003842 4.3e-13 77.8 80 56.2
Glyma.15G011400 Glycine max HOM05D001629 ORTHO05D003842 7.4e-13 77.0 80 55.0
Lalb_Chr22g0351061 Lupinus albus HOM05D001629 ORTHO05D003842 1.6e-12 75.9 80 53.8
Medtr4g011440 Medicago truncatula HOM05D001629 ORTHO05D003842 2.1e-12 75.5 81 56.8
Ca_07176_v3 Cicer arietinum L. HOM05D001629 ORTHO05D003842 2.8e-12 75.1 81 54.3
Glyma.07G033000 Glycine max HOM05D001629 ORTHO05D003842 2.8e-12 75.1 81 55.6
Phvul.005G174100 Phaseolus vulgaris HOM05D001629 ORTHO05D003842 3.7e-12 74.7 80 53.8
Glyma.13G362400 Glycine max HOM05D001629 ORTHO05D003842 4.8e-12 74.3 84 51.2
VMungo0331G0430 Vigna mungo HOM05D001629 ORTHO05D003842 6.2e-12 73.9 81 54.3
Phvul.010G153000 Phaseolus vulgaris HOM05D001629 ORTHO05D003842 8.2e-12 73.6 81 54.3
Lsat_1_v5_gn_5_132821 Lactuca sativa HOM05D001629 ORTHO05D003842 1.1e-11 73.2 64 64.1
arahy.Tifrunner.gnm1.ann1.62DI5E Arachis hypogaea HOM05D001629 ORTHO05D003842 1.4e-11 72.8 80 52.5
arahy.Tifrunner.gnm1.ann1.I8612F Arachis hypogaea HOM05D001629 ORTHO05D003842 1.4e-11 72.8 80 52.5
Lj3g0002261 Lotus japonicus HOM05D001629 ORTHO05D003842 1.4e-11 72.8 81 55.6
CANSAT56G2113 Cannabis sativa HOM05D001629 ORTHO05D003842 1.8e-11 72.4 65 58.5
TPR.G38620 Trifolium pratense HOM05D001629 ORTHO05D003842 1.8e-11 72.4 81 53.1
Lj3g0014600 Lotus japonicus HOM05D001629 ORTHO05D003842 3.1e-11 71.6 58 65.5
Psat7g254800 Pisum sativum HOM05D001629 ORTHO05D003842 3.1e-11 71.6 81 54.3
TWI75G0218 Tripterygium wilfordii HOM05D001629 ORTHO05D003842 3.1e-11 71.6 58 63.8
Glyma.08G209200 Glycine max HOM05D001629 ORTHO05D003842 6.9e-11 70.5 81 51.9
GSVIVG01017215001 Vitis vinifera HOM05D001629 ORTHO05D003842 1.5e-10 69.3 57 66.7
CSS0040650 Camellia sinensis var. sinensis HOM05D001629 ORTHO05D003842 2.0e-10 68.9 65 55.4
Lalb_Chr04g0262531 Lupinus albus HOM05D001629 ORTHO05D003842 2.0e-10 68.9 64 62.5
RcHm_v2.0_Chr2g0137001 Rosa chinensis HOM05D001629 ORTHO05D003842 2.0e-10 68.9 80 51.2
SGA_v2.0_scaffold16G07628 Striga asiatica HOM05D001629 ORTHO05D003842 2.6e-10 68.6 65 60.0
CAN.G395.37 Capsicum annuum HOM05D001629 ORTHO05D003842 3.4e-10 68.2 83 48.2
FvH4_6g30590 Fragaria vesca HOM05D001629 ORTHO05D003842 3.4e-10 68.2 80 48.8
FAN14G3427 Fragaria x ananassa HOM05D001629 ORTHO05D003842 3.4e-10 68.2 80 48.8
Actinidia15809 Actinidia chinensis HOM05D001629 ORTHO05D003842 4.5e-10 67.8 65 55.4
HanXRQChr10g0304531 Helianthus annuus HOM05D001629 ORTHO05D003842 7.6e-10 67.0 64 57.8
PGR102G2868 Punica granatum HOM05D001629 ORTHO05D003842 7.6e-10 67.0 64 59.4
Solyc06g067890.3 Solanum lycopersicum HOM05D001629 ORTHO05D003842 7.6e-10 67.0 80 50.0
Sopen06g025170 Solanum pennellii HOM05D001629 ORTHO05D003842 7.6e-10 67.0 80 50.0
TAR636G3140 Trochodendron aralioides HOM05D001629 ORTHO05D003842 7.6e-10 67.0 58 62.1
Hma1.2p1_0515F.1_g170350 Hydrangea macrophylla HOM05D001629 ORTHO05D003842 1.0e-09 66.6 65 52.3
Lalb_Chr07g0177431 Lupinus albus HOM05D001629 ORTHO05D003842 1.0e-09 66.6 64 62.5
Atru.chr1.3158 Acer truncatum HOM05D001629 ORTHO05D003842 1.3e-09 66.2 58 60.3
MD09G1218700 Malus domestica HOM05D001629 ORTHO05D003842 1.3e-09 66.2 58 60.3
MD17G1202000 Malus domestica HOM05D001629 ORTHO05D003842 1.3e-09 66.2 58 60.3
Oeu020518.1 Olea europaea HOM05D001629 ORTHO05D003842 1.3e-09 66.2 65 56.9
Prupe.3G077700 Prunus persica HOM05D001629 ORTHO05D003842 1.3e-09 66.2 58 60.3
PGSC0003DMG400028548 Solanum tuberosum HOM05D001629 ORTHO05D003842 1.3e-09 66.2 80 48.8
AUR62016405 Chenopodium quinoa HOM05D001629 ORTHO05D003842 1.7e-09 65.9 58 60.3
ClCG09G002540 Citrullus lanatus HOM05D001629 ORTHO05D003842 1.7e-09 65.9 64 56.2
FAN09G3957 Fragaria x ananassa HOM05D001629 ORTHO05D003842 1.7e-09 65.9 80 47.5
Sc12g0008950 Simmondsia chinensis HOM05D001629 ORTHO05D003842 1.7e-09 65.9 77 50.6
TAR383G0187 Trochodendron aralioides HOM05D001629 ORTHO05D003842 1.7e-09 65.9 58 58.6
Ciclev10025112m.g Citrus clementina HOM05D001629 ORTHO05D003842 2.2e-09 65.5 58 62.1
CsaV3_7G032780 Cucumis sativus L. HOM05D001629 ORTHO05D003842 2.2e-09 65.5 64 56.2
Manes.04G119000 Manihot esculenta HOM05D001629 ORTHO05D003842 2.2e-09 65.5 58 56.9
Sed0020470 Sechium edule HOM05D001629 ORTHO05D003842 2.2e-09 65.5 64 56.2
Haze_16498 Corylus avellana HOM05D001629 ORTHO05D003842 2.9e-09 65.1 58 62.1
Haze_16500 Corylus avellana HOM05D001629 ORTHO05D003842 2.9e-09 65.1 58 62.1
Dinv30554 Davidia involucrata HOM05D001629 ORTHO05D003842 2.9e-09 65.1 65 53.8
Oeu052307.2 Olea europaea HOM05D001629 ORTHO05D003842 2.9e-09 65.1 80 47.5
Migut.D01045 Erythranthe guttata HOM05D001629 ORTHO05D003842 3.8e-09 64.7 64 57.8
Rhsim08G0217400 Rhododendron simsii HOM05D001629 ORTHO05D003842 3.8e-09 64.7 65 58.5
Dinv38080 Davidia involucrata HOM05D001629 ORTHO05D003842 5.0e-09 64.3 65 53.8
BcaC03g15987 Brassica carinata HOM05D001629 ORTHO05D003842 6.5e-09 63.9 58 60.3
C02p37440 Brassica napus HOM05D001629 ORTHO05D003842 6.5e-09 63.9 58 60.3
BolC2t09756H Brassica oleracea HOM05D001629 ORTHO05D003842 6.5e-09 63.9 58 60.3
Migut.I00812 Erythranthe guttata HOM05D001629 ORTHO05D003842 6.5e-09 63.9 64 54.7
Nitab4.5_0003512g0010 Nicotiana tabacum HOM05D001629 ORTHO05D003842 6.5e-09 63.9 80 50.0
AUR62011590 Chenopodium quinoa HOM05D001629 ORTHO05D003842 8.4e-09 63.5 58 58.6
vmacro18952 Vaccinium macrocarpon HOM05D001629 ORTHO05D003842 8.4e-09 63.5 65 58.5
Nitab4.5_0000620g0170 Nicotiana tabacum HOM05D001629 ORTHO05D003842 1.4e-08 62.8 80 48.8
Peaxi162Scf00207g00740 Petunia axillaris HOM05D001629 ORTHO05D003842 1.4e-08 62.8 65 53.8
SGA_v2.0_scaffold37G14797 Striga asiatica HOM05D001629 ORTHO05D003842 1.4e-08 62.8 64 54.7
MSTRG.22718 Avicennia marina HOM05D001629 ORTHO05D003842 1.9e-08 62.4 65 50.8
QL05p027122 Quercus lobata HOM05D001629 ORTHO05D003842 1.9e-08 62.4 58 60.3
PGSC0003DMG400005696 Solanum tuberosum HOM05D001629 ORTHO05D003842 1.9e-08 62.4 65 52.3
MSTRG.9443 Avicennia marina HOM05D001629 ORTHO05D003842 2.5e-08 62.0 65 55.4
MELO3C023388.2 Cucumis melo HOM05D001629 ORTHO05D003842 2.5e-08 62.0 53 62.3
EL10Ac9g21963 Beta vulgaris HOM05D001629 ORTHO05D003842 3.2e-08 61.6 58 55.2
Eucgr.J03032 Eucalyptus grandis HOM05D001629 ORTHO05D003842 3.2e-08 61.6 64 57.8
Thhalv10018250m.g Eutrema salsugineum HOM05D001629 ORTHO05D003842 3.2e-08 61.6 65 52.3
Lj5A67T54 Lonicera japonica HOM05D001629 ORTHO05D003842 3.2e-08 61.6 79 50.6
Aa31LG4G560 Aethionema arabicum HOM05D001629 ORTHO05D003842 4.2e-08 61.2 58 58.6
AL2G41220 Arabidopsis lyrata HOM05D001629 ORTHO05D003842 4.2e-08 61.2 58 56.9
AT1G80280 Arabidopsis thaliana HOM05D001629 ORTHO05D003842 4.2e-08 61.2 58 56.9
CDE01G0261 Ceratophyllum demersum HOM05D001629 ORTHO05D003842 4.2e-08 61.2 56 55.4
Lj9A503T44 Lonicera japonica HOM05D001629 ORTHO05D003842 4.2e-08 61.2 64 54.7
Solyc03g119990.4 Solanum lycopersicum HOM05D001629 ORTHO05D003842 4.2e-08 61.2 65 52.3
Sopen03g038870 Solanum pennellii HOM05D001629 ORTHO05D003842 4.2e-08 61.2 65 52.3
CDE02G3382 Ceratophyllum demersum HOM05D001629 ORTHO05D003842 5.5e-08 60.8 56 53.6
Cc04_g03830 Coffea canephora HOM05D001629 ORTHO05D003842 5.5e-08 60.8 58 56.9
Manes.11G049200 Manihot esculenta HOM05D001629 ORTHO05D003842 5.5e-08 60.8 58 55.2
HanXRQChr04g0096811 Helianthus annuus HOM05D001629 ORTHO05D003842 7.1e-08 60.5 55 52.7
HanXRQChr16g0504231 Helianthus annuus HOM05D001629 ORTHO05D003842 9.3e-08 60.1 65 50.8
CARHR074210 Cardamine hirsuta HOM05D001629 ORTHO05D003842 1.2e-07 59.7 58 55.2
Nn8g39343 Nelumbo nucifera HOM05D001629 ORTHO05D003842 1.2e-07 59.7 58 55.2
Cpa.g.sc10.201 Carica papaya HOM05D001629 ORTHO05D003842 1.6e-07 59.3 58 56.9
PSO017G4027 Papaver somniferum HOM05D001629 ORTHO05D003842 1.6e-07 59.3 58 48.3
PSO170G0320 Papaver somniferum HOM05D001629 ORTHO05D003842 1.6e-07 59.3 58 48.3
Nn2g11902 Nelumbo nucifera HOM05D001629 ORTHO05D003842 2.1e-07 58.9 55 56.4
Oeu035704.1 Olea europaea HOM05D001629 ORTHO05D003842 2.1e-07 58.9 65 52.3
Hund00570 Selenicereus undatus HOM05D001629 ORTHO05D003842 2.1e-07 58.9 64 51.6
BraA02t07361Z Brassica rapa HOM05D001629 ORTHO05D003842 2.7e-07 58.5 58 53.4
THA.LOC104812487 Tarenaya hassleriana HOM05D001629 ORTHO05D003842 2.7e-07 58.5 58 55.2
A02p23680 Brassica napus HOM05D001629 ORTHO05D003842 3.5e-07 58.2 58 51.7
Aqoxy7G01988 Aquilegia oxysepala HOM05D001629 ORTHO05D003842 4.6e-07 57.8 58 51.7
BcaB05g25283 Brassica carinata HOM05D001629 ORTHO05D003842 6.1e-07 57.4 58 51.7
BcaC05g25500 Brassica carinata HOM05D001629 ORTHO05D003842 6.1e-07 57.4 78 48.7
TAR625G1051 Trochodendron aralioides HOM05D001629 ORTHO05D003842 7.9e-07 57.0 55 56.4
FAN02G1507 Fragaria x ananassa HOM05D001629 ORTHO05D003842 1.0e-06 56.6 80 45.0
Sabra03G0034000 Salix brachista HOM05D001629 ORTHO05D003842 1.3e-06 56.2 58 50.0
Sp5g35530 Schrenkiella parvula HOM05D001629 ORTHO05D003842 1.3e-06 56.2 58 50.0
Gohir.A05G124200 Gossypium hirsutum HOM05D001629 ORTHO05D003842 1.8e-06 55.8 73 46.6
Gohir.D05G125200 Gossypium hirsutum HOM05D001629 ORTHO05D003842 1.8e-06 55.8 73 46.6
Gorai.009G129200 Gossypium raimondii HOM05D001629 ORTHO05D003842 1.8e-06 55.8 73 46.6
THA.LOC104808220 Tarenaya hassleriana HOM05D001629 ORTHO05D003842 1.8e-06 55.8 58 53.4
CAN.G438.91 Capsicum annuum HOM05D001629 ORTHO05D003842 2.3e-06 55.5 64 53.1
Lsat_1_v5_gn_1_33701 Lactuca sativa HOM05D001629 ORTHO05D003842 2.3e-06 55.5 55 52.7
Sp1g13850 Schrenkiella parvula HOM05D001629 ORTHO05D003842 2.3e-06 55.5 64 53.1
BcaC05g25626 Brassica carinata HOM05D001629 ORTHO05D003842 3.0e-06 55.1 79 48.1
Carub.0002s2728 Capsella rubella HOM05D001629 ORTHO05D003842 3.0e-06 55.1 58 51.7
ECA234G2115 Erigeron canadensis HOM05D001629 ORTHO05D003842 3.0e-06 55.1 45 51.1
Potri.003G059400 Populus trichocarpa HOM05D001629 ORTHO05D003842 3.9e-06 54.7 58 48.3
AT1G15490 Arabidopsis thaliana HOM05D001629 ORTHO05D003842 5.1e-06 54.3 64 51.6
DCAR_025468 Daucus carota HOM05D001629 ORTHO05D003842 5.1e-06 54.3 68 45.6
A06p11550 Brassica napus HOM05D001629 ORTHO05D003842 6.7e-06 53.9 63 52.4
C05p13680 Brassica napus HOM05D001629 ORTHO05D003842 6.7e-06 53.9 64 51.6
BolC5t30105H Brassica oleracea HOM05D001629 ORTHO05D003842 6.7e-06 53.9 64 51.6
BraA06t24329Z Brassica rapa HOM05D001629 ORTHO05D003842 6.7e-06 53.9 63 52.4


User provided reference genes

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