Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 9.6e-33 142.9 72 100.0
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.0e-14 82.0 73 54.8
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 2.0e-14 82.0 60 66.7
TPR.G37221 Trifolium pratense HOM05D002271 ORTHO05D002346 2.0e-14 82.0 76 61.8
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 2.6e-14 81.6 60 65.0
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 2.6e-14 81.6 72 55.6
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 3.4e-14 81.3 58 65.5
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 1.0e-13 79.7 76 60.5
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.0e-13 79.7 78 60.3
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.2e-13 78.6 72 56.9
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 2.2e-13 78.6 68 58.8
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 5.0e-13 77.4 63 65.1
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.1e-12 76.3 76 57.9
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 2.5e-12 75.1 73 54.8
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 4.2e-12 74.3 72 52.8
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 1.6e-11 72.4 71 56.3
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 2.1e-11 72.0 75 53.3
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 2.7e-11 71.6 74 52.7
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 3.6e-11 71.2 72 58.3
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 7.9e-11 70.1 73 50.7
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 7.9e-11 70.1 67 53.7
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 1.0e-10 69.7 77 48.1
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.4e-10 69.3 57 56.1
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 2.3e-10 68.6 76 52.6
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 3.9e-10 67.8 66 57.6
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 8.8e-10 66.6 67 53.7
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 1.1e-09 66.2 60 55.0
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 3.3e-09 64.7 76 53.9
Manes.11G030700 Manihot esculenta HOM05D008383 ORTHO05D010186 7.4e-09 63.5 76 52.6
Medtr2g100460 Medicago truncatula HOM05D000526 ORTHO05D000956 7.4e-09 63.5 55 74.5
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 9.7e-09 63.2 72 48.6
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 9.7e-09 63.2 72 48.6
Psat0s2235g0120 Pisum sativum HOM05D009467 ORTHO05D319781 9.7e-09 63.2 47 68.1
Psat5g294760 Pisum sativum HOM05D009467 ORTHO05D010186 9.7e-09 63.2 75 54.7
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.3e-08 62.8 71 49.3
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.3e-08 62.8 71 49.3
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 1.3e-08 62.8 71 53.5
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.3e-08 62.8 72 48.6
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 1.3e-08 62.8 71 46.5
TAR626G1700 Trochodendron aralioides HOM05D001398 ORTHO05D001467 1.7e-08 62.4 68 47.1
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 2.8e-08 61.6 78 44.9
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 3.7e-08 61.2 64 51.6
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 3.7e-08 61.2 61 57.4
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 8.2e-08 60.1 73 49.3
Nn8g38999 Nelumbo nucifera HOM05D008383 ORTHO05D010186 8.2e-08 60.1 73 45.2
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 1.1e-07 59.7 65 50.8
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 6.9e-07 57.0 75 52.0
COL.COLO4_30544 Corchorus olitorius HOM05D008383 ORTHO05D010186 1.5e-06 55.8 69 49.3
AT1G51915 Arabidopsis thaliana HOM05D009023 ORTHO05D011144 2.6e-06 55.1 61 45.9
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 4.5e-06 54.3 54 50.0
Manes.11G030600 Manihot esculenta HOM05D008383 ORTHO05D250481 4.5e-06 54.3 82 42.7
AL1G59962 Arabidopsis lyrata HOM05D009023 ORTHO05D011144 5.9e-06 53.9 61 44.3
Sabra01G0138800 Salix brachista HOM05D008383 ORTHO05D010186 5.9e-06 53.9 77 48.1


User provided reference genes

Program Settings