Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g099060 Medicago truncatula HOM05D000254 ORTHO05D000165 4.9e-157 557.8 282 100.0
TPR.G16720 Trifolium pratense HOM05D000254 ORTHO05D000165 1.6e-19 100.9 151 45.7
Lj3g0000312 Lotus japonicus HOM05D000254 ORTHO05D000165 4.2e-15 86.3 149 42.3
Lj3g0023514 Lotus japonicus HOM05D000254 ORTHO05D000165 4.2e-15 86.3 149 42.3
CSS0010411 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.2e-14 84.7 151 38.4
CSS0016798 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.2e-14 84.7 151 38.4
CSS0014803 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.5e-14 83.2 152 37.5
CSS0026480 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.0e-13 81.6 148 39.9
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 1.0e-13 81.6 165 37.0
CSS0000515 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.3e-13 80.5 151 37.7
TWI75G0257 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 6.7e-13 79.0 156 37.8
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-12 77.0 148 39.9
CSS0005767 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-12 76.6 152 38.2
Lj3g0003777 Lotus japonicus HOM05D000254 ORTHO05D000165 4.3e-12 76.3 138 41.3
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 5.7e-12 75.9 151 37.7
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.3e-11 74.7 148 37.8
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 1.3e-11 74.7 148 37.2
Aqoxy4G01490 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 1.6e-11 74.3 156 37.8
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 1.6e-11 74.3 148 37.2
TPR.G22178 Trifolium pratense HOM05D000254 ORTHO05D000165 1.6e-11 74.3 151 37.7
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 3.7e-11 73.2 148 36.5
Ciclev10010383m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.7e-11 73.2 133 42.9
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 6.3e-11 72.4 148 36.5
Aqoxy4G01821 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 8.2e-11 72.0 151 35.8
CSS0017362 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.2e-11 72.0 152 36.2
CANSAT56G1760 Cannabis sativa HOM05D000254 ORTHO05D000165 8.2e-11 72.0 148 37.2
Lj3g0023878 Lotus japonicus HOM05D000254 ORTHO05D000165 1.1e-10 71.6 143 39.2
Oeu010375.1 Olea europaea HOM05D000254 ORTHO05D000165 1.4e-10 71.2 148 37.2
Ciclev10018973m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.8e-10 70.9 164 37.2
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.8e-10 70.9 155 35.5
TWI36G1440 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.8e-10 70.9 172 34.3
Atru.chr3.2712 Acer truncatum HOM05D000254 ORTHO05D000165 2.4e-10 70.5 152 36.8
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.1e-10 70.1 148 33.8
CSS0044286 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.1e-10 69.7 164 34.1
TWI73G0830 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 4.1e-10 69.7 163 35.0
CANSAT54G0894 Cannabis sativa HOM05D000254 ORTHO05D000165 5.3e-10 69.3 148 36.5
CSS0003175 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.9e-10 68.9 152 36.2
Hund04406 Selenicereus undatus HOM05D000254 ORTHO05D010549 6.9e-10 68.9 144 36.1
CSS0000948 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.0e-10 68.6 148 37.2
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.0e-10 68.6 82 50.0
TPR.G39467 Trifolium pratense HOM05D000254 ORTHO05D000165 1.2e-09 68.2 147 38.8
CSS0005581 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-09 67.4 141 36.2
Glyma.18G136400 Glycine max HOM05D000254 ORTHO05D000165 2.6e-09 67.0 148 35.8
PSO063G3009 Papaver somniferum HOM05D000254 ORTHO05D000165 3.4e-09 66.6 143 39.2
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 3.4e-09 66.6 163 33.7
CSS0033120 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.5e-09 66.2 152 34.9
THA.LOC104804546 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 4.5e-09 66.2 149 37.6
CSS0004379 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.9e-09 65.9 152 36.8
CSS0031583 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.9e-09 65.9 152 36.8
Ciclev10003597m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.9e-09 65.9 148 33.1
Ciclev10013968m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.9e-09 65.9 138 38.4
PSO135G0412 Papaver somniferum HOM05D000254 ORTHO05D000165 5.9e-09 65.9 139 38.8
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 7.6e-09 65.5 148 35.1
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 7.6e-09 65.5 165 35.8
TPR.G3195 Trifolium pratense HOM05D000254 ORTHO05D000165 7.6e-09 65.5 141 35.5
Ciclev10010399m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.0e-08 65.1 125 38.4
TWI63G0882 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.0e-08 65.1 163 32.5
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.3e-08 64.7 144 37.5
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.3e-08 64.7 144 37.5
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 1.3e-08 64.7 143 35.7
Lj1g0021543 Lotus japonicus HOM05D000254 ORTHO05D000165 1.3e-08 64.7 133 37.6
Oeu053131.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-08 64.7 148 35.1
PSO339G6725 Papaver somniferum HOM05D000254 ORTHO05D000165 1.3e-08 64.7 143 38.5
Aqoxy7G02328 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 2.2e-08 63.9 139 38.1
CSS0043729 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.9e-08 63.5 144 35.4
FvH4_3g43192 Fragaria vesca HOM05D000254 ORTHO05D000165 3.8e-08 63.2 148 31.8
FvH4_3g43193 Fragaria vesca HOM05D000254 ORTHO05D000165 3.8e-08 63.2 148 31.8
PSO349G0278 Papaver somniferum HOM05D000254 ORTHO05D000165 3.8e-08 63.2 143 37.8
QL04p037136 Quercus lobata HOM05D000254 ORTHO05D000165 5.0e-08 62.8 71 49.3
MD03G1081700 Malus domestica HOM05D000254 ORTHO05D000165 6.5e-08 62.4 148 35.8
Manes.14G154402 Manihot esculenta HOM05D000254 ORTHO05D000165 6.5e-08 62.4 129 37.2
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.4e-08 62.0 144 37.5
Oeu018287.1 Olea europaea HOM05D000254 ORTHO05D000165 8.4e-08 62.0 165 34.5
THA.LOC104825349 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 8.4e-08 62.0 133 39.1
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.1e-07 61.6 148 31.8
AL3G40330 Arabidopsis lyrata HOM05D000254 ORTHO05D000165 1.4e-07 61.2 148 32.4
Glyma.U031215 Glycine max HOM05D000254 ORTHO05D000165 1.4e-07 61.2 130 37.7
PSO478G3137 Papaver somniferum HOM05D000254 ORTHO05D000165 1.4e-07 61.2 149 33.6
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 1.9e-07 60.8 143 33.6
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 1.9e-07 60.8 156 32.7
Thhalv10027556m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.5e-07 60.5 148 31.8
TAR079G0001 Trochodendron aralioides HOM05D000254 ORTHO05D000165 2.5e-07 60.5 69 50.7
Ciclev10003272m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.2e-07 60.1 148 31.8
Thhalv10001868m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.2e-07 60.1 148 33.1
Oeu048100.1 Olea europaea HOM05D000254 ORTHO05D000165 3.2e-07 60.1 142 34.5
CSS0016575 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.2e-07 59.7 110 40.0
AT1G19260 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 5.5e-07 59.3 154 32.5
PSO063G1418 Papaver somniferum HOM05D000254 ORTHO05D000165 5.5e-07 59.3 138 34.1
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 7.2e-07 58.9 133 36.8
Thhalv10015783m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 9.3e-07 58.5 147 29.9
PSO210G3278 Papaver somniferum HOM05D000254 ORTHO05D000165 9.3e-07 58.5 154 29.9
Oeu016858.1 Olea europaea HOM05D000254 ORTHO05D000165 1.2e-06 58.2 152 34.2
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 1.2e-06 58.2 148 31.8
AT3G29765 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.6e-06 57.8 154 31.8
Thhalv10002330m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.6e-06 57.8 151 33.1
Oeu005841.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-06 57.8 151 34.4
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 2.1e-06 57.4 83 47.0
Oeu017580.1 Olea europaea HOM05D000254 ORTHO05D000165 2.1e-06 57.4 151 31.8
TPR.G11041 Trifolium pratense HOM05D000254 ORTHO05D000165 2.1e-06 57.4 79 43.0
Thhalv10022584m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.7e-06 57.0 148 33.1
Oeu031385.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-06 57.0 151 31.8
Oeu046850.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-06 57.0 148 34.5
THA.LOC104804719 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.7e-06 57.0 132 35.6
Ah.06g188330 Amaranthus hybridus HOM05D000254 ORTHO05D000165 3.5e-06 56.6 144 31.9
Ah.12g063700 Amaranthus hybridus HOM05D000254 ORTHO05D000165 3.5e-06 56.6 138 33.3
ECA240G0854 Erigeron canadensis HOM05D000254 ORTHO05D000165 3.5e-06 56.6 158 29.7
PSO832G4173 Papaver somniferum HOM05D000254 ORTHO05D000165 3.5e-06 56.6 127 38.6
TPR.G8984 Trifolium pratense HOM05D000254 ORTHO05D000165 4.6e-06 56.2 144 34.7
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 6.1e-06 55.8 120 40.0
TPR.G31365 Trifolium pratense HOM05D000254 ORTHO05D000165 6.1e-06 55.8 87 40.2


User provided reference genes

Program Settings