Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 0.0e+00 1122.5 543 100.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 2.1e-297 1025.0 542 91.0
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 5.7e-295 1016.9 542 90.0
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 3.5e-292 1007.7 558 86.0
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.1e-282 976.1 552 85.7
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 4.0e-280 967.6 569 82.2
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 5.7e-279 963.8 543 85.5
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.6e-276 955.7 507 88.2
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 4.7e-273 944.1 592 77.7
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 8.6e-267 923.3 505 86.9
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 4.2e-266 921.0 505 86.7
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 7.2e-266 920.2 511 83.0
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 4.7e-265 917.5 499 85.0
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 1.6e-260 902.5 501 82.6
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 5.0e-259 897.5 528 78.8
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 1.9e-258 895.6 498 83.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 2.1e-257 892.1 511 81.4
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 4.7e-257 891.0 498 82.3
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 1.4e-256 889.4 498 82.7
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.4e-256 889.4 498 82.5
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 4.0e-256 887.9 528 78.0
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.2e-255 886.3 490 83.5
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.5e-255 885.9 498 82.3
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 9.8e-255 883.2 498 81.9
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 1.3e-254 882.9 498 81.9
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 2.2e-254 882.1 499 81.6
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 2.2e-254 882.1 535 77.2
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 8.3e-254 880.2 544 77.6
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 3.2e-253 878.2 524 78.1
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 7.0e-253 877.1 516 79.7
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 7.0e-253 877.1 544 75.9
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.2e-252 876.3 487 82.1
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 2.7e-252 875.2 498 82.7
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 5.0e-251 870.9 487 83.2
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 7.3e-250 867.1 499 79.0
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 9.5e-250 866.7 499 79.8
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.4e-248 862.8 498 79.9
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.8e-248 862.4 487 81.3
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 2.3e-248 862.1 498 78.7
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 5.2e-248 860.9 498 80.5
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 6.8e-248 860.5 506 78.3
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 6.8e-248 860.5 506 78.3
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 8.9e-248 860.1 490 81.6
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.5e-247 859.4 499 79.6
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 4.4e-247 857.8 490 80.2
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 1.3e-246 856.3 519 77.3
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.3e-246 856.3 558 73.1
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 3.7e-246 854.7 520 76.5
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 3.7e-246 854.7 506 77.9
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 6.4e-246 854.0 499 78.8
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 9.2e-245 850.1 496 77.8
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 1.2e-244 849.7 524 76.1
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 2.7e-244 848.6 490 78.8
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 3.5e-244 848.2 510 77.1
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.3e-243 846.3 537 73.9
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 3.0e-243 845.1 559 71.7
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 3.0e-243 845.1 528 74.6
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 6.6e-243 844.0 553 71.4
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 8.6e-243 843.6 517 75.0
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.1e-242 843.2 558 72.4
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 2.1e-241 839.0 487 78.6
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 3.6e-241 838.2 498 76.7
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 8.1e-241 837.0 502 76.1
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 6.8e-240 833.9 499 78.2
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 2.6e-239 832.0 508 75.2
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.6e-236 822.8 540 71.9
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 2.7e-236 822.0 490 75.9
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.7e-235 819.3 538 71.4
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 8.6e-235 817.0 490 74.9
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.1e-232 810.1 549 69.9
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.4e-232 808.9 555 68.1
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 8.9e-232 807.0 498 76.9
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 1.9e-229 799.3 453 81.7
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 4.8e-225 784.6 498 72.1
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 4.0e-224 781.6 464 76.1
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 9.0e-224 780.4 507 71.4
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 9.0e-224 780.4 499 73.3
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 4.4e-223 778.1 710 56.8
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 2.4e-221 772.3 499 74.9
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 3.2e-221 771.9 553 67.8
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 3.3e-218 761.9 659 60.5
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 2.6e-215 752.3 492 69.9
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 9.9e-215 750.4 490 70.0
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 3.8e-214 748.4 418 81.1
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 1.0e-211 740.3 418 80.6
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 5.8e-207 724.5 498 69.7
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 2.9e-206 722.2 498 69.5
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.7e-201 705.3 506 67.6
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.3e-195 686.8 383 80.9
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 7.4e-186 654.4 424 69.3
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 4.7e-180 635.2 396 75.5
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 2.9e-166 589.3 500 55.8
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 5.5e-157 558.5 506 56.1
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 3.6e-156 555.8 319 77.7
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.4e-155 553.9 525 53.5
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 2.0e-154 550.1 348 73.6
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 2.0e-143 513.5 502 51.0
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 7.3e-141 505.0 391 63.2
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 8.0e-140 501.5 512 49.2
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 5.2e-139 498.8 354 68.6
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 2.4e-120 436.8 452 52.9
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.7e-116 422.5 254 77.6
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 6.7e-86 322.4 186 82.3
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 2.9e-81 307.0 187 78.1
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.8e-75 287.7 174 77.0
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 4.5e-74 283.1 170 77.6
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 3.9e-70 270.0 151 79.5
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 6.3e-68 262.7 152 77.6
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 1.4e-64 251.5 150 74.7
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.2e-56 223.8 150 71.3
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 2.8e-52 210.7 116 82.8
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 9.4e-48 195.7 106 87.7
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.8e-36 157.5 127 63.8
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.6e-34 151.8 127 61.4
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 2.6e-29 134.4 80 77.5
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.2e-28 131.3 71 84.5
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 7.0e-27 126.3 112 59.8
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 7.0e-27 126.3 112 59.8
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.9e-24 118.2 65 81.5
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.9e-17 94.0 78 65.4
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 1.1e-16 92.4 62 75.8
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 8.3e-12 76.3 51 62.7
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.9e-11 75.1 57 59.6
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 9.2e-11 72.8 59 61.0
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.7e-10 71.2 41 82.9
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 3.0e-09 67.8 40 80.0
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 3.0e-09 67.8 40 80.0
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 1.5e-08 65.5 53 58.5
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.3e-08 64.3 34 79.4


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