Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 1.5e-65 252.7 127 100.0
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 6.4e-48 194.1 128 78.9
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 1.3e-43 179.9 118 73.7
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 3.6e-43 178.3 121 71.9
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 3.6e-43 178.3 121 71.9
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 8.1e-43 177.2 123 71.5
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 5.8e-41 171.0 121 71.9
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 6.4e-40 167.5 118 72.0
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 1.4e-39 166.4 113 72.6
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 1.9e-39 166.0 117 70.1
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 2.4e-39 165.6 123 67.5
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 7.1e-39 164.1 118 68.6
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 1.2e-38 163.3 123 65.9
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.2e-38 163.3 121 66.9
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 2.7e-38 162.2 123 65.0
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 1.8e-37 159.5 93 82.8
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 2.3e-37 159.1 116 69.0
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 2.3e-37 159.1 116 68.1
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 3.0e-37 158.7 117 61.5
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 3.9e-37 158.3 116 68.1
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 1.5e-36 156.4 112 66.1
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 1.9e-36 156.0 117 65.0
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 1.9e-36 156.0 120 62.5
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 2.5e-36 155.6 120 65.8
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 4.3e-36 154.8 116 63.8
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 7.4e-36 154.1 116 66.4
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 1.6e-35 152.9 119 63.0
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 1.6e-35 152.9 119 63.0
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 2.1e-35 152.5 119 63.0
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 2.1e-35 152.5 119 61.3
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 2.1e-35 152.5 126 60.3
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 2.8e-35 152.1 118 62.7
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 2.8e-35 152.1 119 62.2
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 4.8e-35 151.4 119 62.2
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 4.8e-35 151.4 119 62.2
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 4.8e-35 151.4 119 62.2
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 8.1e-35 150.6 119 61.3
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 8.1e-35 150.6 118 62.7
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 1.8e-34 149.4 118 66.9
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 2.4e-34 149.1 118 61.0
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 3.1e-34 148.7 105 70.5
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 3.1e-34 148.7 127 61.4
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 4.0e-34 148.3 119 61.3
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 4.0e-34 148.3 122 62.3
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 6.9e-34 147.5 123 60.2
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 9.0e-34 147.1 119 61.3
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 9.0e-34 147.1 122 57.4
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 3.4e-33 145.2 116 61.2
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 3.4e-33 145.2 105 65.7
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 5.8e-33 144.4 116 62.9
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 7.6e-33 144.1 120 58.3
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 9.9e-33 143.7 120 65.8
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 1.3e-32 143.3 118 61.0
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 1.7e-32 142.9 123 58.5
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 1.7e-32 142.9 123 58.5
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 2.2e-32 142.5 122 55.7
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 2.2e-32 142.5 120 58.3
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 2.2e-32 142.5 119 60.5
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 8.4e-32 140.6 118 59.3
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 1.1e-31 140.2 120 57.5
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 1.1e-31 140.2 120 58.3
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 1.9e-31 139.4 119 59.7
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 2.4e-31 139.0 105 68.6
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.2e-31 138.7 118 56.8
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 4.2e-31 138.3 120 57.5
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 7.1e-31 137.5 118 56.8
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 1.6e-30 136.3 124 56.5
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.6e-30 136.3 125 60.8
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 1.6e-30 136.3 125 60.0
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 2.7e-30 135.6 96 66.7
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 6.0e-30 134.4 115 58.3
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 1.0e-29 133.7 93 68.8
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 2.3e-29 132.5 116 59.5
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 3.9e-29 131.7 116 58.6
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 5.1e-29 131.3 106 62.3
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 6.7e-29 131.0 115 53.0
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 9.0e-26 120.6 120 47.5
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.5e-25 119.8 95 62.1
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 1.3e-24 116.7 122 52.5
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 3.2e-23 112.1 117 52.1
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 5.5e-23 111.3 109 47.7
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.0e-21 105.5 89 56.2
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 1.9e-20 102.8 100 55.0
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 5.7e-20 101.3 89 57.3
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 3.1e-18 95.5 117 46.2
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 5.3e-18 94.7 122 45.9
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 1.5e-17 93.2 77 57.1
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 3.2e-15 85.5 89 50.6
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.8e-13 79.7 119 44.5
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 4.3e-12 75.1 114 35.1
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 2.8e-11 72.4 54 72.2
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 1.8e-10 69.7 50 58.0
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 3.8e-08 62.0 83 39.8


User provided reference genes

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