Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 3.6e-238 828.2 524 100.0
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 3.5e-164 582.4 529 73.9
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 1.1e-141 507.7 533 69.6
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 1.6e-124 450.7 533 56.8
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 3.5e-92 343.2 470 55.3
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 1.6e-89 334.3 466 55.6
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 3.7e-89 333.2 568 44.2
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 2.7e-39 167.5 584 31.0
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 1.7e-33 148.3 646 33.4
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 3.3e-29 134.0 520 34.0
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 1.5e-26 125.2 458 33.4
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 7.5e-26 122.9 511 28.0
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 8.6e-22 109.4 206 43.2
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 1.9e-21 108.2 209 42.6
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 8.0e-20 102.8 201 35.8
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 3.0e-19 100.9 193 39.4
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 3.4e-18 97.4 204 40.7
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 7.5e-18 96.3 192 35.4
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 8.3e-17 92.8 168 39.3
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 1.4e-16 92.0 294 28.9
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 2.0e-15 88.2 172 37.8
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 4.0e-11 73.9 224 30.4
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 2.6e-10 71.2 223 30.5
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 4.4e-10 70.5 241 28.6
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 7.5e-10 69.7 175 35.4
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 1.1e-08 65.9 282 26.2
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 1.9e-08 65.1 196 30.1
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 3.2e-08 64.3 211 28.0
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 9.2e-08 62.8 211 28.0
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 9.2e-08 62.8 184 28.8
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 9.2e-08 62.8 230 27.8
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 1.2e-07 62.4 212 29.2
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 4.6e-07 60.5 154 32.5
HanXRQChr02g0058051 Helianthus annuus HOM05D008213 ORTHO05D009787 1.0e-06 59.3 153 33.3


User provided reference genes

Program Settings