Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 2.4e-258 895.2 521 100.0
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 2.6e-164 582.8 529 73.9
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 4.1e-133 479.2 529 63.3
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 1.0e-120 438.0 525 52.4
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 2.8e-105 386.7 463 58.1
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 3.2e-101 373.2 479 56.6
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 2.4e-93 347.1 561 42.6
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 4.6e-44 183.3 582 31.4
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 2.0e-34 151.4 647 31.5
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 4.5e-31 140.2 456 34.4
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 7.7e-31 139.4 522 31.2
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 1.4e-27 128.6 481 28.1
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 1.1e-26 125.6 776 28.4
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 3.7e-25 120.6 220 38.6
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 4.8e-25 120.2 272 37.5
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 6.3e-25 119.8 168 45.8
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 1.9e-21 108.2 185 42.2
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 1.9e-21 108.2 180 41.7
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 4.7e-20 103.6 199 41.7
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 6.8e-19 99.8 356 28.4
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 7.5e-18 96.3 201 41.3
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 2.0e-15 88.2 228 33.3
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 2.7e-12 77.8 187 34.2
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 1.2e-10 72.4 297 26.3
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 1.5e-10 72.0 235 28.9
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 3.4e-10 70.9 220 27.7
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 5.7e-10 70.1 284 26.8
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 7.5e-10 69.7 324 26.9
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 9.8e-10 69.3 298 26.2
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 9.8e-10 69.3 322 27.6
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 9.8e-10 69.3 220 27.7
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 6.3e-09 66.6 216 27.3
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 1.1e-08 65.9 196 32.7
HanXRQChr02g0058051 Helianthus annuus HOM05D008213 ORTHO05D009787 1.2e-07 62.4 153 32.7
TAR362G1061 Trochodendron aralioides HOM05D008213 ORTHO05D009787 7.7e-07 59.7 336 27.1
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 1.0e-06 59.3 285 25.3
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 2.3e-06 58.2 302 25.8
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 2.9e-06 57.8 134 30.6
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 5.0e-06 57.0 175 28.0


User provided reference genes

Program Settings