Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g091040 Medicago truncatula HOM05D000439 ORTHO05D002302 7.9e-201 704.1 527 100.0
Medtr2g091090 Medicago truncatula HOM05D000439 ORTHO05D002302 1.5e-178 630.2 655 79.1
Medtr5g078500 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-69 268.5 234 72.2
Medtr2g091250 Medicago truncatula HOM05D000439 ORTHO05D002302 1.4e-59 235.0 249 62.7
Medtr2g091110 Medicago truncatula HOM05D000439 ORTHO05D002302 1.3e-46 191.8 277 44.8
Medtr2g091260 Medicago truncatula HOM05D000439 ORTHO05D002302 5.0e-46 189.9 876 39.4
Medtr2g091330 Medicago truncatula HOM05D000439 ORTHO05D002302 3.5e-39 167.2 278 47.1
Medtr6g045183 Medicago truncatula HOM05D000439 ORTHO05D002302 4.6e-39 166.8 775 42.5
Medtr2g091105 Medicago truncatula HOM05D000439 ORTHO05D002302 3.0e-38 164.1 707 42.9
Medtr5g078510 Medicago truncatula HOM05D000439 ORTHO05D002302 9.5e-37 159.1 104 75.0
Ca_01454_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 1.8e-35 154.8 510 31.0
Medtr2g091240 Medicago truncatula HOM05D000439 ORTHO05D002302 9.2e-32 142.5 108 66.7
TPR.G11624 Trifolium pratense HOM05D000439 ORTHO05D002302 2.7e-31 141.0 113 64.6
TPR.G22515 Trifolium pratense HOM05D000439 ORTHO05D002302 3.5e-31 140.6 103 68.9
TPR.G20708 Trifolium pratense HOM05D000439 ORTHO05D002302 3.9e-30 137.1 105 69.5
Medtr2g091245 Medicago truncatula HOM05D000439 ORTHO05D002302 8.6e-30 136.0 681 46.3
TPR.G20710 Trifolium pratense HOM05D000439 ORTHO05D002302 1.1e-29 135.6 104 69.2
TPR.G20706 Trifolium pratense HOM05D000439 ORTHO05D002302 2.5e-29 134.4 114 66.7
TPR.G11588 Trifolium pratense HOM05D000439 ORTHO05D002302 8.1e-28 129.4 155 54.8
Psat5g276040 Pisum sativum HOM05D000439 ORTHO05D002302 2.3e-27 127.9 104 68.3
TPR.G11525 Trifolium pratense HOM05D000439 ORTHO05D002302 3.1e-27 127.5 325 34.2
Medtr2g093010 Medicago truncatula HOM05D000439 ORTHO05D002302 7.5e-26 122.9 293 35.2
Medtr2g091080 Medicago truncatula HOM05D000439 ORTHO05D002302 1.3e-25 122.1 256 44.9
TPR.G11522 Trifolium pratense HOM05D000439 ORTHO05D002302 4.9e-25 120.2 104 59.6
Lj3g0018169 Lotus japonicus HOM05D000439 ORTHO05D002302 1.3e-22 112.1 103 57.3
Medtr2g091325 Medicago truncatula HOM05D000439 ORTHO05D002302 1.3e-22 112.1 213 42.3
Psat5g275960 Pisum sativum HOM05D000439 ORTHO05D002302 1.3e-22 112.1 149 47.0
Medtr2g104190 Medicago truncatula HOM05D000439 ORTHO05D002302 2.3e-22 111.3 240 36.7
Lj4g0018346 Lotus japonicus HOM05D000439 ORTHO05D002302 3.9e-22 110.5 103 58.3
Medtr2g010420 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-21 109.0 147 45.6
Medtr2g091315 Medicago truncatula HOM05D000439 ORTHO05D002302 1.5e-21 108.6 303 34.0
Medtr2g103620 Medicago truncatula HOM05D000439 ORTHO05D002302 7.3e-21 106.3 133 48.9
TPR.G33824 Trifolium pratense HOM05D000439 ORTHO05D002302 7.3e-21 106.3 103 53.4
Medtr2g091335 Medicago truncatula HOM05D000439 ORTHO05D002302 9.5e-21 105.9 258 37.6
TPR.G11256 Trifolium pratense HOM05D000439 ORTHO05D002302 1.6e-20 105.1 101 53.5
TPR.G32660 Trifolium pratense HOM05D000439 ORTHO05D002302 2.1e-20 104.8 104 52.9
Medtr2g091285 Medicago truncatula HOM05D000439 ORTHO05D002302 1.4e-19 102.1 273 37.0
TPR.G12457 Trifolium pratense HOM05D000439 ORTHO05D002302 1.8e-19 101.7 102 49.0
Medtr2g091010 Medicago truncatula HOM05D000439 ORTHO05D002302 3.1e-19 100.9 241 36.1
Medtr2g091370 Medicago truncatula HOM05D000439 ORTHO05D002302 3.1e-19 100.9 101 54.5
Medtr2g091290 Medicago truncatula HOM05D000439 ORTHO05D002302 4.0e-19 100.5 86 59.3
TPR.G9133 Trifolium pratense HOM05D000439 ORTHO05D002302 2.0e-18 98.2 104 51.9
Lalb_Chr14g0367481 Lupinus albus HOM05D000439 ORTHO05D002302 2.6e-18 97.8 101 49.5
Medtr4g084930 Medicago truncatula HOM05D000439 ORTHO05D002302 1.4e-16 92.0 98 51.0
arahy.Tifrunner.gnm1.ann1.BZ4NKF Arachis hypogaea HOM05D008486 ORTHO05D010657 1.9e-16 91.7 103 51.5
Medtr2g091005 Medicago truncatula HOM05D000439 ORTHO05D002302 4.1e-16 90.5 291 30.6
arahy.Tifrunner.gnm1.ann1.4R5PNE Arachis hypogaea HOM05D008486 ORTHO05D010657 5.4e-16 90.1 103 50.5
Medtr5g038810 Medicago truncatula HOM05D000439 ORTHO05D002302 9.2e-16 89.4 208 36.5
Lj1g0021649 Lotus japonicus HOM05D000439 ORTHO05D002302 6.0e-15 86.7 101 47.5
Medtr7g056313 Medicago truncatula HOM05D000439 ORTHO05D002302 6.0e-15 86.7 159 42.1
Lalb_Chr14g0367471 Lupinus albus HOM05D000439 ORTHO05D002302 7.8e-15 86.3 96 47.9
arahy.Tifrunner.gnm1.ann1.9L902K Arachis hypogaea HOM05D000439 ORTHO05D002302 1.7e-14 85.1 102 44.1
Psat0s1858g0280 Pisum sativum HOM05D000439 ORTHO05D002302 1.7e-14 85.1 321 29.9
Psat5g276000 Pisum sativum HOM05D000439 ORTHO05D002302 2.3e-14 84.7 214 36.9
arahy.Tifrunner.gnm1.ann1.5F1FKW Arachis hypogaea HOM05D000439 ORTHO05D002302 3.0e-14 84.3 103 48.5
arahy.Tifrunner.gnm1.ann1.8T23IY Arachis hypogaea HOM05D000439 ORTHO05D002302 3.9e-14 84.0 102 45.1
QL03p002694 Quercus lobata HOM05D000439 ORTHO05D002302 5.6e-13 80.1 102 45.1
Glyma.11G109500 Glycine max HOM05D000439 ORTHO05D002302 2.8e-12 77.8 102 44.1
Medtr2g103640 Medicago truncatula HOM05D000439 ORTHO05D002302 3.6e-12 77.4 96 50.0
TPR.G22517 Trifolium pratense HOM05D000439 ORTHO05D002302 1.8e-11 75.1 59 62.7
arahy.Tifrunner.gnm1.ann1.825KYQ Arachis hypogaea HOM05D000439 ORTHO05D002302 2.4e-11 74.7 101 41.6
Ca_20059_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 4.0e-11 73.9 100 47.0
Medtr3g110385 Medicago truncatula HOM05D000439 ORTHO05D002302 1.5e-10 72.0 114 42.1
arahy.Tifrunner.gnm1.ann1.MSPK7M Arachis hypogaea HOM05D000439 ORTHO05D002302 2.0e-10 71.6 100 40.0
arahy.Tifrunner.gnm1.ann1.824BKL Arachis hypogaea HOM05D000439 ORTHO05D002302 2.6e-10 71.2 100 41.0
Lj3g0018557 Lotus japonicus HOM05D000439 ORTHO05D002302 2.6e-10 71.2 103 40.8
CiPaw.07G011500 Carya illinoinensis HOM05D000439 ORTHO05D002302 3.4e-10 70.9 102 40.2
MD12G1229900 Malus domestica HOM05D000439 ORTHO05D002302 4.4e-10 70.5 86 40.7
Ca_01469_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 1.3e-09 68.9 63 61.9
Medtr8g467200 Medicago truncatula HOM05D000439 ORTHO05D002302 2.2e-09 68.2 100 45.0
MD12G1229200 Malus domestica HOM05D000439 ORTHO05D002302 3.8e-09 67.4 82 40.2
MBI16_g11558_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 4.9e-09 67.0 100 40.0
Medtr2g064120 Medicago truncatula HOM05D000439 ORTHO05D000739 1.1e-08 65.9 90 50.0
Medtr2g091025 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-08 65.9 71 49.3
Medtr4g046660 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-08 65.9 101 43.6
MD04G1214700 Malus domestica HOM05D000439 ORTHO05D002302 2.4e-08 64.7 83 41.0
Medtr2g091070 Medicago truncatula HOM05D000439 ORTHO05D002302 2.4e-08 64.7 71 47.9
Prupe.6G334400 Prunus persica HOM05D000439 ORTHO05D002302 5.4e-08 63.5 103 35.9
CANSAT54G2200 Cannabis sativa HOM05D000439 ORTHO05D002302 7.1e-08 63.2 87 35.6
TPR.G20712 Trifolium pratense HOM05D000439 ORTHO05D002302 7.1e-08 63.2 131 43.5
CANSAT54G1104 Cannabis sativa HOM05D000439 ORTHO05D002302 9.3e-08 62.8 101 36.6
RcHm_v2.0_Chr3g0452971 Rosa chinensis HOM05D000439 ORTHO05D002302 9.3e-08 62.8 114 35.1
Medtr2g091280 Medicago truncatula HOM05D000439 ORTHO05D002302 1.2e-07 62.4 285 28.8
Prupe.6G334700 Prunus persica HOM05D000439 ORTHO05D002302 1.6e-07 62.0 84 42.9
CiPaw.07G010900 Carya illinoinensis HOM05D000439 ORTHO05D001363 3.5e-07 60.8 86 31.4
TPR.G8353 Trifolium pratense HOM05D000439 ORTHO05D002302 3.5e-07 60.8 104 38.5
Gorai.013G116600 Gossypium raimondii HOM05D000439 ORTHO05D002302 4.6e-07 60.5 102 36.3
TAR629G2317 Trochodendron aralioides HOM05D000439 ORTHO05D001363 4.6e-07 60.5 140 32.1
Prupe.6G334200 Prunus persica HOM05D000439 ORTHO05D002302 6.0e-07 60.1 98 36.7
SEGI_33574 Sequoiadendron giganteum HOM05D000439 ORTHO05D001363 6.0e-07 60.1 103 34.0
TPR.G23211 Trifolium pratense HOM05D000439 ORTHO05D002302 6.0e-07 60.1 43 69.8
Gohir.D13G104000 Gossypium hirsutum HOM05D000439 ORTHO05D002302 7.8e-07 59.7 102 36.3
Dinv26587 Davidia involucrata HOM05D000439 ORTHO05D002302 1.0e-06 59.3 82 34.1
arahy.Tifrunner.gnm1.ann1.Z2T2IJ Arachis hypogaea HOM05D000439 ORTHO05D002302 1.3e-06 58.9 55 50.9
Rhsim07G0176800 Rhododendron simsii HOM05D000439 ORTHO05D002302 1.3e-06 58.9 87 40.2
RcHm_v2.0_Chr3g0452991 Rosa chinensis HOM05D000439 ORTHO05D002302 1.3e-06 58.9 84 39.3
FvH4_6g04511 Fragaria vesca HOM05D014759 ORTHO05D011638 1.7e-06 58.5 89 37.1
vmacro23264 Vaccinium macrocarpon HOM05D000439 ORTHO05D011638 1.7e-06 58.5 84 34.5
Nn1g03256 Nelumbo nucifera HOM05D000439 ORTHO05D001363 2.3e-06 58.2 84 41.7
RcHm_v2.0_Chr3g0453001 Rosa chinensis HOM05D000439 ORTHO05D002302 2.3e-06 58.2 97 38.1
FvH4_6g04630 Fragaria vesca HOM05D014759 ORTHO05D011638 3.0e-06 57.8 81 38.3
FvH4_6g04380 Fragaria vesca HOM05D000439 ORTHO05D002302 3.9e-06 57.4 102 38.2
TPR.G20709 Trifolium pratense HOM05D000439 ORTHO05D002302 3.9e-06 57.4 48 68.8
FAN02G3337 Fragaria x ananassa HOM05D014759 ORTHO05D011638 5.1e-06 57.0 81 38.3
Manes.09G160800 Manihot esculenta HOM05D000439 ORTHO05D012413 6.6e-06 56.6 104 32.7
MD03G1060500 Malus domestica HOM05D000439 ORTHO05D002302 8.7e-06 56.2 83 33.7


User provided reference genes

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