Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g090350 Medicago truncatula HOM05D007676 ORTHO05D009456 7.6e-67 256.9 120 100.0
TPR.G6389 Trifolium pratense HOM05D007676 ORTHO05D009456 2.2e-45 185.7 119 72.3
Lalb_Chr14g0366911 Lupinus albus HOM05D007676 ORTHO05D009456 3.6e-32 141.7 120 60.0
Glyma.12G204200 Glycine max HOM05D007676 ORTHO05D009456 1.4e-31 139.8 118 61.9
Lj3g0021089 Lotus japonicus HOM05D007676 ORTHO05D009456 3.7e-29 131.7 120 56.7
Phvul.005G103800 Phaseolus vulgaris HOM05D007676 ORTHO05D009456 2.1e-24 115.9 118 51.7
Lalb_Chr00c25g0407471 Lupinus albus HOM05D007676 ORTHO05D009456 1.0e-23 113.6 120 50.0
Lalb_Chr14g0366961 Lupinus albus HOM05D007676 ORTHO05D009456 3.0e-23 112.1 118 50.0
Lalb_Chr00c08g0404761 Lupinus albus HOM05D007676 ORTHO05D009456 1.5e-22 109.8 115 48.7
VMungo1080G1717 Vigna mungo HOM05D007676 ORTHO05D009456 6.3e-21 104.4 102 52.0
TWI23G0504 Tripterygium wilfordii HOM05D007676 ORTHO05D009456 2.2e-18 95.9 99 49.5
Lalb_Chr00c13g0404911 Lupinus albus HOM05D007676 ORTHO05D009456 1.5e-17 93.2 110 47.3
Aa31LG5G2990 Aethionema arabicum HOM05D007676 ORTHO05D009456 1.9e-17 92.8 117 41.9
Lalb_Chr00c08g0404751 Lupinus albus HOM05D007676 ORTHO05D009456 1.9e-17 92.8 110 47.3
THA.LOC104801166 Tarenaya hassleriana HOM05D007676 ORTHO05D009456 7.2e-17 90.9 102 46.1
QL04p080567 Quercus lobata HOM05D007676 ORTHO05D009456 1.2e-16 90.1 113 42.5
Ciclev10017923m.g Citrus clementina HOM05D007676 ORTHO05D009456 1.8e-15 86.3 119 39.5
Atru.chr6.2889 Acer truncatum HOM05D007676 ORTHO05D009456 6.8e-15 84.3 118 39.0
Atru.chr6.2952 Acer truncatum HOM05D007676 ORTHO05D009456 6.8e-15 84.3 118 39.0
PGR042G0101 Punica granatum HOM05D007676 ORTHO05D009456 2.0e-14 82.8 99 43.4
Sp2g09080 Schrenkiella parvula HOM05D007676 ORTHO05D009456 2.0e-14 82.8 121 37.2
Potri.017G013200 Populus trichocarpa HOM05D007676 ORTHO05D009456 3.4e-14 82.0 94 41.5
BcaC03g16646 Brassica carinata HOM05D007676 ORTHO05D009456 5.7e-14 81.3 121 35.5
A02p28290 Brassica napus HOM05D007676 ORTHO05D009456 5.7e-14 81.3 121 35.5
C02p44830 Brassica napus HOM05D007676 ORTHO05D009456 5.7e-14 81.3 121 35.5
BolC2t10523H Brassica oleracea HOM05D007676 ORTHO05D009456 5.7e-14 81.3 121 35.5
BraA02t07864Z Brassica rapa HOM05D007676 ORTHO05D009456 5.7e-14 81.3 121 35.5
Thhalv10003292m.g Eutrema salsugineum HOM05D007676 ORTHO05D009456 5.7e-14 81.3 117 37.6
CARHR178940 Cardamine hirsuta HOM05D007676 ORTHO05D009456 7.5e-14 80.9 96 41.7
Eucgr.A01836 Eucalyptus grandis HOM05D007676 ORTHO05D009456 9.8e-14 80.5 116 42.2
AT5G44265 Arabidopsis thaliana HOM05D007676 ORTHO05D009456 2.2e-13 79.3 117 35.9
AL8G15740 Arabidopsis lyrata HOM05D007676 ORTHO05D009456 2.8e-13 79.0 117 36.8
Carub.0008s0425 Capsella rubella HOM05D007676 ORTHO05D009456 3.7e-13 78.6 119 35.3
Potri.007G138400 Populus trichocarpa HOM05D007676 ORTHO05D009456 7.7e-11 70.9 96 38.5
RcHm_v2.0_Chr2g0127591 Rosa chinensis HOM05D007676 ORTHO05D009456 1.5e-09 66.6 100 39.0
Sabra07G0111500 Salix brachista HOM05D007676 ORTHO05D009456 7.2e-09 64.3 92 37.0
MD06G1108000 Malus domestica HOM05D007676 ORTHO05D009456 2.1e-08 62.8 66 43.9
Lalb_Chr14g0367061 Lupinus albus HOM05D007676 ORTHO05D009456 2.8e-08 62.4 104 33.7
RcHm_v2.0_Chr2g0127571 Rosa chinensis HOM05D007676 ORTHO05D009456 4.7e-08 61.6 95 35.8
Prupe.3G134200 Prunus persica HOM05D007676 ORTHO05D009456 1.0e-07 60.5 113 37.2
MD14G1128300 Malus domestica HOM05D007676 ORTHO05D009456 1.4e-07 60.1 88 39.8
Ciclev10018195m.g Citrus clementina HOM05D007676 ORTHO05D009456 1.8e-07 59.7 104 37.5
Potri.002G012300 Populus trichocarpa HOM05D007676 ORTHO05D009456 2.3e-07 59.3 96 34.4
FAN05G5516 Fragaria x ananassa HOM05D007676 ORTHO05D009456 3.0e-07 58.9 96 37.5
Sabra02G0009600 Salix brachista HOM05D007676 ORTHO05D009456 3.0e-07 58.9 97 34.0
MD17G1235700 Malus domestica HOM05D007676 ORTHO05D009456 5.2e-07 58.2 76 40.8
Potri.007G138500 Populus trichocarpa HOM05D007676 ORTHO05D009456 6.8e-07 57.8 113 31.0
FvH4_6g26560 Fragaria vesca HOM05D007676 ORTHO05D009456 8.9e-07 57.4 96 36.5
Carub.0007s1234 Capsella rubella HOM05D007676 ORTHO05D009456 1.2e-06 57.0 104 37.5
Sabra07G0111600 Salix brachista HOM05D007676 ORTHO05D009456 2.6e-06 55.8 113 30.1
Prupe.2G079300 Prunus persica HOM05D007676 ORTHO05D009456 7.5e-06 54.3 116 34.5


User provided reference genes

Program Settings