Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.4e-28 128.3 71 100.0
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 4.1e-20 100.9 71 81.7
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 2.5e-17 91.7 71 77.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 5.8e-14 80.5 76 68.4
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 9.9e-14 79.7 78 65.4
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.3e-13 79.3 73 71.2
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 6.4e-13 77.0 73 71.2
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 1.4e-12 75.9 73 67.1
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 1.9e-12 75.5 74 64.9
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 4.1e-12 74.3 79 63.3
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 1.6e-11 72.4 71 69.0
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 2.7e-11 71.6 71 60.6
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.7e-11 71.6 79 59.5
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 4.6e-11 70.9 72 69.4
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 1.3e-10 69.3 77 57.1
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 1.3e-10 69.3 72 61.1
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 1.3e-10 69.3 72 61.1
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 2.3e-10 68.6 75 60.0
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 2.3e-10 68.6 73 67.1
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 3.0e-10 68.2 73 61.6
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 3.0e-10 68.2 79 62.0
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 5.1e-10 67.4 73 60.3
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 5.1e-10 67.4 73 60.3
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 6.6e-10 67.0 75 60.0
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 8.6e-10 66.6 81 56.8
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 8.6e-10 66.6 73 60.3
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 8.6e-10 66.6 82 53.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.5e-09 65.9 84 53.6
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 1.5e-09 65.9 69 62.3
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.9e-09 65.5 82 57.3
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.5e-09 65.1 73 60.3
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 2.5e-09 65.1 74 56.8
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 3.3e-09 64.7 81 53.1
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 3.3e-09 64.7 81 53.1
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.3e-09 64.7 71 56.3
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 3.3e-09 64.7 74 56.8
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.3e-09 64.3 80 57.5
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 4.3e-09 64.3 76 56.6
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 7.3e-09 63.5 81 49.4
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 7.3e-09 63.5 81 49.4
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 7.3e-09 63.5 76 52.6
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 7.3e-09 63.5 79 54.4
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 1.6e-08 62.4 84 53.6
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.6e-08 62.4 72 56.9
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.8e-08 61.6 73 58.9
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 3.6e-08 61.2 81 53.1
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 3.6e-08 61.2 79 51.9
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 4.7e-08 60.8 73 60.3
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 8.1e-08 60.1 82 52.4
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 8.1e-08 60.1 73 53.4
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 8.1e-08 60.1 76 52.6
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 8.1e-08 60.1 80 52.5
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 1.4e-07 59.3 74 55.4
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.8e-07 58.9 72 52.8
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 1.8e-07 58.9 75 58.7
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 1.8e-07 58.9 81 51.9
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 1.8e-07 58.9 75 49.3
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 2.4e-07 58.5 81 51.9
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 2.4e-07 58.5 81 51.9
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 2.4e-07 58.5 81 51.9
Ca_17688_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 2.4e-07 58.5 71 62.0
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 2.4e-07 58.5 71 50.7
HanXRQChr06g0171331 Helianthus annuus HOM05D005953 ORTHO05D004056 3.1e-07 58.2 76 53.9
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 3.1e-07 58.2 71 52.1
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 4.0e-07 57.8 71 50.7
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 4.0e-07 57.8 84 47.6
Psat2g130600 Pisum sativum HOM05D008304 ORTHO05D004056 4.0e-07 57.8 71 59.2
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 5.2e-07 57.4 68 55.9
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 5.2e-07 57.4 71 50.7
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 6.8e-07 57.0 78 46.2
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 6.8e-07 57.0 74 55.4
Lsat_1_v5_gn_4_66421 Lactuca sativa HOM05D005953 ORTHO05D004056 6.8e-07 57.0 66 54.5
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 6.8e-07 57.0 79 46.8
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 8.9e-07 56.6 80 47.5
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 8.9e-07 56.6 71 52.1
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 8.9e-07 56.6 75 48.0
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 1.2e-06 56.2 90 45.6
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 1.2e-06 56.2 82 51.2
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 1.2e-06 56.2 74 56.8
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.2e-06 56.2 74 48.6
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.5e-06 55.8 50 66.0
DCAR_021242 Daucus carota HOM05D005953 ORTHO05D004056 2.0e-06 55.5 73 52.1
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 2.0e-06 55.5 83 50.6
Gohir.D02G180001 Gossypium hirsutum HOM05D025024 ORTHO05D004056 2.6e-06 55.1 73 52.1
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 2.6e-06 55.1 79 51.9
Hund01100 Selenicereus undatus HOM05D005953 ORTHO05D004056 2.6e-06 55.1 71 46.5
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 2.6e-06 55.1 78 52.6
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 4.4e-06 54.3 78 48.7
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 4.4e-06 54.3 78 48.7
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 4.4e-06 54.3 76 48.7
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 4.4e-06 54.3 79 50.6
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 4.4e-06 54.3 77 49.4
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 4.4e-06 54.3 79 50.6
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 4.4e-06 54.3 90 42.2
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 4.4e-06 54.3 71 50.7
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 5.8e-06 53.9 77 51.9
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 5.8e-06 53.9 75 50.7
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 5.8e-06 53.9 71 50.7
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 5.8e-06 53.9 71 50.7
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 5.8e-06 53.9 71 50.7
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 5.8e-06 53.9 71 50.7
Gohir.A03G156801 Gossypium hirsutum HOM05D025024 ORTHO05D004056 5.8e-06 53.9 73 50.7
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 7.6e-06 53.5 71 50.7
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 7.6e-06 53.5 76 50.0
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 7.6e-06 53.5 80 48.8
DCAR_009746 Daucus carota HOM05D005953 ORTHO05D004056 9.9e-06 53.1 75 54.7
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 9.9e-06 53.1 78 50.0
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 9.9e-06 53.1 76 48.7
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 9.9e-06 53.1 76 50.0


User provided reference genes

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