Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g090150 Medicago truncatula HOM05D010177 ORTHO05D003109 3.5e-131 471.9 280 100.0
Psat5g270560 Pisum sativum HOM05D010177 ORTHO05D003109 1.2e-78 297.4 291 62.2
Ca_01527_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 2.7e-62 243.0 288 56.2
TPR.G40438 Trifolium pratense HOM05D010177 ORTHO05D003109 6.3e-48 195.3 139 82.0
Lj3g0005406 Lotus japonicus HOM05D010177 ORTHO05D003109 1.2e-41 174.5 295 49.5
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 4.7e-35 152.5 286 46.2
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 4.0e-34 149.4 282 43.6
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 1.9e-31 140.6 299 41.5
Ca_20682_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 3.0e-29 133.3 309 40.8
Lalb_Chr14g0366711 Lupinus albus HOM05D010177 ORTHO05D003109 6.6e-29 132.1 293 39.6
arahy.Tifrunner.gnm1.ann1.48X98F Arachis hypogaea HOM05D010177 ORTHO05D003109 1.5e-28 131.0 291 39.9
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 7.3e-28 128.6 309 39.8
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 1.6e-27 127.5 308 43.8
Glyma.U031322 Glycine max HOM05D010177 ORTHO05D003109 2.8e-27 126.7 284 41.5
Glyma.U031310 Glycine max HOM05D010177 ORTHO05D003109 3.4e-25 119.8 310 41.6
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 3.4e-25 119.8 325 38.8
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 1.7e-24 117.5 329 37.1
Phvul.005G106600 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 7.8e-22 108.6 284 37.3
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 5.1e-21 105.9 341 36.4
Phvul.011G112800 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 2.9e-16 90.1 320 36.6
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 1.9e-15 87.4 314 38.2
VMungo1127G1338 Vigna mungo HOM05D010177 ORTHO05D003109 7.8e-14 82.0 328 35.4
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 1.0e-13 81.6 323 36.8
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 3.0e-13 80.1 343 30.0
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 5.6e-12 75.9 339 29.8
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 7.3e-12 75.5 337 32.0
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 4.8e-11 72.8 312 34.9
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 4.8e-11 72.8 319 32.6
Medtr4g046123 Medicago truncatula HOM05D010177 ORTHO05D003109 1.1e-10 71.6 367 30.2
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 6.9e-10 68.9 343 29.4
FAN05G0655 Fragaria x ananassa HOM05D010652 ORTHO05D003109 9.0e-10 68.6 294 32.0
FAN05G4761 Fragaria x ananassa HOM05D010652 ORTHO05D003109 9.0e-10 68.6 294 32.0
Medtr3g083320 Medicago truncatula HOM05D058796 ORTHO05D003109 9.0e-10 68.6 68 63.2
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.2e-09 68.2 299 33.4
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.2e-09 68.2 299 33.4
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 1.5e-09 67.8 268 35.1
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 1.5e-09 67.8 305 35.1
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 2.6e-09 67.0 320 30.3
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 7.6e-09 65.5 318 35.5
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 9.9e-09 65.1 298 31.2
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 1.7e-08 64.3 310 30.0
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 2.2e-08 63.9 300 29.7
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 2.9e-08 63.5 339 28.9
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 3.8e-08 63.2 306 30.7
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 6.4e-08 62.4 303 31.7
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 6.4e-08 62.4 298 30.2
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 8.4e-08 62.0 332 28.0
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 1.1e-07 61.6 298 31.5
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.1e-07 61.6 306 30.7
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 1.4e-07 61.2 316 29.4
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 1.9e-07 60.8 306 28.8
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 4.2e-07 59.7 303 29.4
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 4.2e-07 59.7 310 30.0
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 5.4e-07 59.3 305 29.5
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 5.4e-07 59.3 343 32.1
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 5.4e-07 59.3 317 28.4
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 9.3e-07 58.5 258 31.4
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.2e-06 58.2 307 28.0
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 1.2e-06 58.2 289 33.9
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.2e-06 58.2 211 31.8
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.2e-06 58.2 308 30.8
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 1.6e-06 57.8 326 30.4
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.6e-06 57.8 310 30.0
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 2.1e-06 57.4 325 28.0
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 2.7e-06 57.0 303 34.0
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.7e-06 57.0 308 28.2
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 2.7e-06 57.0 310 30.0
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 3.5e-06 56.6 309 27.8
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 3.5e-06 56.6 304 28.9
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 3.5e-06 56.6 304 28.9
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 6.0e-06 55.8 304 34.5
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 6.0e-06 55.8 342 32.5
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 6.0e-06 55.8 340 28.8
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 7.9e-06 55.5 308 27.9


User provided reference genes

Program Settings