Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 4.6e-28 127.1 61 100.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 8.7e-27 122.9 60 96.7
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 8.7e-27 122.9 60 96.7
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 8.7e-27 122.9 60 96.7
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.1e-16 87.8 60 70.0
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 1.5e-15 85.5 42 95.2
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.5e-15 84.0 60 68.3
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 1.0e-14 82.8 60 65.0
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 1.7e-14 82.0 60 66.7
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 6.5e-14 80.1 60 63.3
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-13 78.6 57 66.7
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.2e-13 77.8 60 63.3
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 9.4e-13 76.3 60 61.7
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 1.2e-12 75.9 61 62.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.2e-12 75.9 60 61.7
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.6e-12 75.5 57 63.2
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 2.1e-12 75.1 60 61.7
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-12 74.7 57 64.9
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 1.0e-11 72.8 60 60.0
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.0e-11 72.8 59 59.3
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.4e-11 72.4 60 66.7
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 2.3e-11 71.6 60 63.3
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.0e-11 71.2 60 63.3
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.0e-11 71.2 60 63.3
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 6.7e-11 70.1 60 63.3
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 8.8e-11 69.7 62 58.1
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 8.8e-11 69.7 62 58.1
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 8.8e-11 69.7 62 58.1
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 8.8e-11 69.7 60 61.7
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 1.1e-10 69.3 60 58.3
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.1e-10 69.3 60 58.3
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 2.0e-10 68.6 59 59.3
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 2.0e-10 68.6 58 60.3
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 3.3e-10 67.8 62 54.8
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 3.3e-10 67.8 62 54.8
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 3.3e-10 67.8 60 56.7
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 4.4e-10 67.4 60 60.0
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.7e-10 66.2 60 58.3
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 9.7e-10 66.2 59 57.6
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 9.7e-10 66.2 59 57.6
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 9.7e-10 66.2 59 57.6
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 9.7e-10 66.2 59 57.6
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 9.7e-10 66.2 59 57.6
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 9.7e-10 66.2 59 57.6
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 2.2e-09 65.1 59 55.9
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 2.2e-09 65.1 60 51.7
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.8e-09 64.7 54 64.8
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 6.3e-09 63.5 54 64.8
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 8.2e-09 63.2 60 51.7
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 1.1e-08 62.8 32 87.5
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-08 62.0 63 52.4
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 2.4e-08 61.6 59 52.5
TPR.G16230 Trifolium pratense HOM05D004473 ORTHO05D005652 9.1e-08 59.7 33 84.8
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 3.4e-07 57.8 60 51.7
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 1.3e-06 55.8 51 54.9


User provided reference genes

Program Settings