Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g086750 Medicago truncatula HOM05D009586 ORTHO05D010928 5.9e-91 337.4 160 100.0
Actinidia34848 Actinidia chinensis HOM05D009586 ORTHO05D010928 3.9e-26 122.1 103 64.1
Dinv06712 Davidia involucrata HOM05D009586 ORTHO05D010928 3.9e-26 122.1 62 93.5
Hma1.2p1_1371F.1_g278630 Hydrangea macrophylla HOM05D009586 ORTHO05D010928 5.1e-26 121.7 61 95.1
Peaxi162Scf00651g00632 Petunia axillaris HOM05D009586 ORTHO05D010928 8.7e-26 120.9 68 86.8
CAN.G761.2 Capsicum annuum HOM05D009586 ORTHO05D010928 2.5e-25 119.4 62 91.9
DCAR_031804 Daucus carota HOM05D009586 ORTHO05D010928 4.8e-24 115.2 61 90.2
DCAR_032039 Daucus carota HOM05D009586 ORTHO05D010928 4.8e-24 115.2 61 90.2
Solyc00g049220.1 Solanum lycopersicum HOM05D009586 ORTHO05D010928 6.2e-24 114.8 62 88.7
Peaxi162Scf02041g00002 Petunia axillaris HOM05D009586 ORTHO05D010928 2.6e-22 109.4 56 92.9
Nitab4.5_0000172g1290 Nicotiana tabacum HOM05D009586 ORTHO05D010928 5.8e-22 108.2 62 82.3
Sc11g0004380 Simmondsia chinensis HOM05D009586 ORTHO05D010928 1.7e-21 106.7 59 89.8
CAN.G134.18 Capsicum annuum HOM05D009586 ORTHO05D010928 2.2e-21 106.3 62 83.9
Nitab4.5_0004300g0220 Nicotiana tabacum HOM05D009586 ORTHO05D010928 4.2e-20 102.1 62 79.0
Sopen05g012680 Solanum pennellii HOM05D009586 ORTHO05D010928 7.1e-20 101.3 62 82.3
Hund04269 Selenicereus undatus HOM05D009586 ORTHO05D010928 1.5e-17 93.6 59 83.1
RhsimMtG0005300 Rhododendron simsii HOM05D009586 ORTHO05D010928 2.8e-16 89.4 53 81.1
CAN.G811.4 Capsicum annuum HOM05D009586 ORTHO05D010928 6.2e-16 88.2 60 70.0
Lj9A462T70 Lonicera japonica HOM05D001855 ORTHO05D002034 1.3e-13 80.5 54 70.4
Nitab4.5_0001992g0070 Nicotiana tabacum HOM05D009586 ORTHO05D010928 1.2e-11 73.9 48 72.9
CDE02G4386 Ceratophyllum demersum HOM05D009586 ORTHO05D010928 4.3e-09 65.5 49 73.5
BcaC09g49581 Brassica carinata HOM05D009586 ORTHO05D010928 1.5e-06 57.0 55 60.0
Nitab4.5_0003331g0110 Nicotiana tabacum HOM05D009586 ORTHO05D010928 2.6e-06 56.2 35 74.3


User provided reference genes

Program Settings