Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g084485 Medicago truncatula HOM05D000254 ORTHO05D000165 1.4e-50 202.6 99 100.0
Glyma.03G160800 Glycine max HOM05D000254 ORTHO05D000165 4.0e-29 131.3 116 62.1
Glyma.01G083800 Glycine max HOM05D000254 ORTHO05D000165 1.2e-28 129.8 125 58.4
Glyma.15G026200 Glycine max HOM05D000254 ORTHO05D000165 2.6e-28 128.6 125 57.6
Glyma.01G155700 Glycine max HOM05D000254 ORTHO05D000165 3.4e-28 128.3 125 57.6
Glyma.01G009100 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.02G075500 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.03G059500 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.07G188300 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.07G229400 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.08G123900 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.09G092200 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.09G205200 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.11G185400 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.17G071500 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.17G248000 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.18G099300 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.18G248500 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Glyma.20G083200 Glycine max HOM05D000254 ORTHO05D000165 4.4e-28 127.9 125 57.6
Lj1g0014598 Lotus japonicus HOM05D000254 ORTHO05D000165 9.8e-28 126.7 125 56.8
Glyma.02G054300 Glycine max HOM05D000254 ORTHO05D000165 1.3e-27 126.3 125 56.8
Glyma.02G075400 Glycine max HOM05D000254 ORTHO05D000165 1.3e-27 126.3 125 56.8
Glyma.04G172200 Glycine max HOM05D000254 ORTHO05D000165 1.3e-27 126.3 125 56.8
Glyma.19G084500 Glycine max HOM05D000254 ORTHO05D000165 1.3e-27 126.3 125 56.8
Glyma.06G110300 Glycine max HOM05D000254 ORTHO05D000165 1.7e-27 125.9 125 56.8
Glyma.15G258000 Glycine max HOM05D000254 ORTHO05D000165 2.2e-27 125.6 125 56.8
TPR.G17479 Trifolium pratense HOM05D003135 ORTHO05D000165 2.2e-27 125.6 125 57.6
Glyma.17G162400 Glycine max HOM05D000254 ORTHO05D000165 2.9e-27 125.2 125 56.8
Glyma.17G230400 Glycine max HOM05D000254 ORTHO05D000165 2.9e-27 125.2 125 56.0
Glyma.13G203500 Glycine max HOM05D000254 ORTHO05D000165 3.7e-27 124.8 125 56.8
Glyma.05G111600 Glycine max HOM05D000254 ORTHO05D000165 4.9e-27 124.4 125 56.8
Glyma.11G170400 Glycine max HOM05D000254 ORTHO05D000165 4.9e-27 124.4 125 56.8
Lj2g0011354 Lotus japonicus HOM05D000254 ORTHO05D000165 4.9e-27 124.4 117 59.0
Glyma.U036600 Glycine max HOM05D000254 ORTHO05D000165 6.4e-27 124.0 125 56.0
Glyma.10G133400 Glycine max HOM05D000254 ORTHO05D000165 8.3e-27 123.6 125 56.0
TPR.G18474 Trifolium pratense HOM05D000254 ORTHO05D000165 8.3e-27 123.6 125 56.8
Lj4g0023060 Lotus japonicus HOM05D000254 ORTHO05D000165 4.1e-26 121.3 125 55.2
LjContig00141g0020943 Lotus japonicus HOM05D000254 ORTHO05D000165 4.1e-26 121.3 125 55.2
Glyma.09G085100 Glycine max HOM05D000254 ORTHO05D000165 7.0e-26 120.6 125 56.0
Lj4g0019202 Lotus japonicus HOM05D000254 ORTHO05D000165 7.0e-26 120.6 125 54.4
LjContig00141g0013529 Lotus japonicus HOM05D000254 ORTHO05D000165 9.2e-26 120.2 125 54.4
Glyma.10G133300 Glycine max HOM05D000254 ORTHO05D000165 1.2e-25 119.8 125 54.4
Lj6g0025209 Lotus japonicus HOM05D000254 ORTHO05D000165 1.2e-25 119.8 125 52.8
Lj5g0002707 Lotus japonicus HOM05D000254 ORTHO05D000165 2.0e-25 119.0 133 52.6
Lj6g0003945 Lotus japonicus HOM05D000254 ORTHO05D000165 2.0e-25 119.0 125 52.8
LjContig00141g0001801 Lotus japonicus HOM05D000254 ORTHO05D000165 4.6e-25 117.9 125 53.6
TPR.G35935 Trifolium pratense HOM05D000254 ORTHO05D000165 5.9e-25 117.5 125 55.2
Lj3g0010857 Lotus japonicus HOM05D000254 ORTHO05D000165 1.7e-24 115.9 125 53.6
TPR.G16812 Trifolium pratense HOM05D000254 ORTHO05D000165 3.0e-24 115.2 125 54.4
Lj3g0027175 Lotus japonicus HOM05D000254 ORTHO05D000165 3.9e-24 114.8 125 52.8
Lj5g0023700 Lotus japonicus HOM05D000254 ORTHO05D000165 3.9e-24 114.8 125 53.6
Glyma.01G024100 Glycine max HOM05D000254 ORTHO05D000165 2.3e-21 105.5 139 46.8
Glyma.08G271300 Glycine max HOM05D000254 ORTHO05D000165 6.8e-21 104.0 61 77.0
TPR.G24147 Trifolium pratense HOM05D000254 ORTHO05D000165 9.8e-20 100.1 87 59.8
TPR.G36051 Trifolium pratense HOM05D000254 ORTHO05D000165 2.2e-19 99.0 87 59.8
Glyma.14G102400 Glycine max HOM05D000254 ORTHO05D000165 2.4e-18 95.5 54 79.6
Glyma.10G093700 Glycine max HOM05D000254 ORTHO05D000165 6.0e-17 90.9 112 52.7
Glyma.18G180700 Glycine max HOM05D000254 ORTHO05D000165 1.3e-16 89.7 125 47.2
TPR.G20961 Trifolium pratense HOM05D000254 ORTHO05D000165 2.8e-14 82.0 46 78.3
Medtr4g109010 Medicago truncatula HOM05D000041 ORTHO05D000061 1.1e-13 80.1 44 81.8
TPR.G948 Trifolium pratense HOM05D000254 ORTHO05D000165 2.3e-13 79.0 46 76.1
TPR.G39588 Trifolium pratense HOM05D000254 ORTHO05D000165 4.0e-13 78.2 103 49.5
Glyma.18G214900 Glycine max HOM05D000254 ORTHO05D000165 5.4e-10 67.8 61 55.7
SGA_v2.0_scaffold125G33690 Striga asiatica HOM05D000254 ORTHO05D000165 3.5e-09 65.1 125 34.4
SGA_v2.0_scaffold3G01776 Striga asiatica HOM05D000254 ORTHO05D000165 3.5e-09 65.1 125 34.4
CSS0026480 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 7.8e-09 63.9 125 35.2
Manes.08G061350 Manihot esculenta HOM05D000254 ORTHO05D000165 1.0e-08 63.5 125 34.4
Hund01117 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.3e-08 63.2 123 35.0
Hund04406 Selenicereus undatus HOM05D000254 ORTHO05D010549 1.3e-08 63.2 123 35.0
Glyma.02G209300 Glycine max HOM05D000254 ORTHO05D000165 1.7e-08 62.8 113 31.9
MD12G1128200 Malus domestica HOM05D000254 ORTHO05D000165 1.7e-08 62.8 125 36.0
PSO063G6635 Papaver somniferum HOM05D000254 ORTHO05D000165 1.7e-08 62.8 125 33.6
TPR.G3195 Trifolium pratense HOM05D000254 ORTHO05D000165 2.3e-08 62.4 125 35.2
Lj3g0019729 Lotus japonicus HOM05D000254 ORTHO05D000165 3.9e-08 61.6 113 32.7
Lj5g0017104 Lotus japonicus HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 30.4
Manes.01G190751 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
Manes.10G094000 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
Manes.12G066306 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
Manes.14G115828 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
Manes.16G054463 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
Manes.16G056300 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
Manes.16G058300 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 32.8
Manes.18G128060 Manihot esculenta HOM05D000254 ORTHO05D000165 3.9e-08 61.6 125 33.6
CSS0017362 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.1e-08 61.2 125 32.0
Lj3g0023514 Lotus japonicus HOM05D000254 ORTHO05D000165 6.6e-08 60.8 125 33.6
CSS0004379 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.6e-08 60.5 123 32.5
CSS0031583 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.6e-08 60.5 123 32.5
FvH4_3g43192 Fragaria vesca HOM05D000254 ORTHO05D000165 8.6e-08 60.5 125 31.2
FvH4_3g43193 Fragaria vesca HOM05D000254 ORTHO05D000165 8.6e-08 60.5 125 31.2
Oeu053131.1 Olea europaea HOM05D000254 ORTHO05D000165 8.6e-08 60.5 125 33.6
TPR.G39467 Trifolium pratense HOM05D000254 ORTHO05D000165 8.6e-08 60.5 125 33.6
Aqoxy4G01490 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 1.1e-07 60.1 125 33.6
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.1e-07 60.1 125 32.0
Glyma.13G083900 Glycine max HOM05D000254 ORTHO05D000165 1.1e-07 60.1 125 30.4
Manes.15G179352 Manihot esculenta HOM05D000254 ORTHO05D000165 1.1e-07 60.1 125 32.8
Oeu005841.1 Olea europaea HOM05D000254 ORTHO05D000165 1.1e-07 60.1 125 33.6
Oeu016858.1 Olea europaea HOM05D000254 ORTHO05D000165 1.1e-07 60.1 125 32.0
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.5e-07 59.7 125 32.0
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 1.5e-07 59.7 125 33.6
Glyma.12G115000 Glycine max HOM05D000254 ORTHO05D000165 1.9e-07 59.3 113 31.0
Lj2g0010951 Lotus japonicus HOM05D000254 ORTHO05D000165 1.9e-07 59.3 125 30.4
Oeu031385.1 Olea europaea HOM05D000254 ORTHO05D000165 1.9e-07 59.3 125 32.0
PSO063G2220 Papaver somniferum HOM05D000254 ORTHO05D000165 1.9e-07 59.3 125 33.6
PSO765G0063 Papaver somniferum HOM05D000254 ORTHO05D000165 1.9e-07 59.3 125 33.6
TWI75G0257 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.9e-07 59.3 125 32.0
CSS0037321 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-07 58.9 114 32.5
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 2.5e-07 58.9 125 34.4
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 2.5e-07 58.9 125 32.8
PSO724G0323 Papaver somniferum HOM05D000254 ORTHO05D000165 2.5e-07 58.9 125 33.6
Aqoxy4G01821 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 3.3e-07 58.5 125 32.8
CSS0005581 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-07 58.5 114 32.5
CSS0016575 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-07 58.5 119 34.5
CSS0033120 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-07 58.5 125 31.2
Manes.10G056233 Manihot esculenta HOM05D000254 ORTHO05D000165 3.3e-07 58.5 125 32.8
Manes.16G056325 Manihot esculenta HOM05D000254 ORTHO05D000165 3.3e-07 58.5 125 32.8
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.3e-07 58.2 125 32.0
Ciclev10033576m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.3e-07 58.2 125 32.0
ECA233G5552 Erigeron canadensis HOM05D000254 ORTHO05D000165 4.3e-07 58.2 122 32.8
Glyma.U031215 Glycine max HOM05D000254 ORTHO05D000165 4.3e-07 58.2 98 35.7
Oeu018287.1 Olea europaea HOM05D000254 ORTHO05D000165 4.3e-07 58.2 125 32.8
Hund30772 Selenicereus undatus HOM05D000254 ORTHO05D000165 4.3e-07 58.2 125 33.6
TWI39G0862 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 4.3e-07 58.2 125 35.2
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.6e-07 57.8 125 33.6
Ciclev10006518m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.6e-07 57.8 90 38.9
Lj3g0023822 Lotus japonicus HOM05D000254 ORTHO05D000165 5.6e-07 57.8 113 31.9
Hund19647 Selenicereus undatus HOM05D000254 ORTHO05D000165 5.6e-07 57.8 125 32.0
TWI63G0882 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 5.6e-07 57.8 125 31.2
CSS0005767 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 32.0
LjContig00357g0001689 Lotus japonicus HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 28.8
Oeu046483.1 Olea europaea HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 32.0
Oeu048100.1 Olea europaea HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 33.6
PSO675G0288 Papaver somniferum HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 32.8
PSO832G3724 Papaver somniferum HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 32.8
Hund01445 Selenicereus undatus HOM05D000254 ORTHO05D000165 7.3e-07 57.4 124 34.7
TWI36G1440 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 7.3e-07 57.4 125 32.0
Ah.03g143940 Amaranthus hybridus HOM05D000254 ORTHO05D000165 9.5e-07 57.0 91 41.8
Lj3g0000312 Lotus japonicus HOM05D000254 ORTHO05D000165 9.5e-07 57.0 125 32.0
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 9.5e-07 57.0 121 33.9
Oeu031951.1 Olea europaea HOM05D000254 ORTHO05D000165 1.2e-06 56.6 126 31.0
Oeu051221.1 Olea europaea HOM05D000254 ORTHO05D000165 1.2e-06 56.6 125 31.2
Hund26328 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.2e-06 56.6 125 32.8
Thhalv10011953m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.6e-06 56.2 103 35.0
Oeu017580.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-06 56.2 125 30.4
PSO063G3009 Papaver somniferum HOM05D000254 ORTHO05D000165 1.6e-06 56.2 125 31.2
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 32.0
Ciclev10013968m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 31.2
Thhalv10002330m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.1e-06 55.8 122 33.6
Oeu010375.1 Olea europaea HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 35.2
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 31.2
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 31.2
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 30.4
Hund08027 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.1e-06 55.8 125 31.2
Ciclev10010383m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.8e-06 55.5 115 33.0
Lj3g0023878 Lotus japonicus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Oeu027308.1 Olea europaea HOM05D000254 ORTHO05D000165 2.8e-06 55.5 130 30.0
Hund01710 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund02893 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund03835 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund06806 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund10770 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund10771 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund12726 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund13045 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund13852 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund14107 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Hund15637 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 55.5 125 32.8
Manes.09G090949 Manihot esculenta HOM05D000254 ORTHO05D000165 3.6e-06 55.1 103 35.9
Manes.14G154402 Manihot esculenta HOM05D000254 ORTHO05D000165 3.6e-06 55.1 98 32.7
PSO339G6725 Papaver somniferum HOM05D000254 ORTHO05D000165 3.6e-06 55.1 125 29.6
Hund09962 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.6e-06 55.1 125 32.0
Hund22241 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.6e-06 55.1 125 32.0
TPR.G22991 Trifolium pratense HOM05D000254 ORTHO05D000165 3.6e-06 55.1 125 29.6
TWI73G0830 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.6e-06 55.1 125 32.0
AL3G40330 Arabidopsis lyrata HOM05D000254 ORTHO05D000165 4.7e-06 54.7 120 33.3
Ciclev10000580m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.7e-06 54.7 125 32.8
ECA236G2413 Erigeron canadensis HOM05D000254 ORTHO05D000165 4.7e-06 54.7 122 32.0
Hund22382 Selenicereus undatus HOM05D000254 ORTHO05D000165 4.7e-06 54.7 122 32.8
CSS0003175 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.2e-06 54.3 125 31.2
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 6.2e-06 54.3 125 31.2
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 6.2e-06 54.3 125 32.0
Hund03455 Selenicereus undatus HOM05D000254 ORTHO05D000165 6.2e-06 54.3 125 32.8
TPR.G22178 Trifolium pratense HOM05D000254 ORTHO05D000165 6.2e-06 54.3 122 33.6
CSS0003068 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.1e-06 53.9 122 32.0
Ciclev10017894m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.1e-06 53.9 111 31.5
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 8.1e-06 53.9 125 33.6
PSO170G0724 Papaver somniferum HOM05D000254 ORTHO05D000165 8.1e-06 53.9 125 32.8
Hund08821 Selenicereus undatus HOM05D000254 ORTHO05D000165 8.1e-06 53.9 125 32.8


User provided reference genes

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