Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g083470 Medicago truncatula HOM05D007765 ORTHO05D009826 1.3e-66 256.1 124 100.0
Medtr4g127700 Medicago truncatula HOM05D007765 ORTHO05D009826 4.8e-24 114.8 110 62.7
TPR.G5381 Trifolium pratense HOM05D007765 ORTHO05D009826 2.5e-20 102.4 117 53.0
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 1.2e-17 93.6 116 52.6
Lj4g0004123 Lotus japonicus HOM05D007765 ORTHO05D009826 1.9e-12 76.3 75 57.3
arahy.Tifrunner.gnm1.ann1.8SXC5S Arachis hypogaea HOM05D007765 ORTHO05D009826 2.7e-11 72.4 115 41.7
TPR.G9240 Trifolium pratense HOM05D007765 ORTHO05D009826 3.6e-11 72.0 66 57.6
Psat1g146600 Pisum sativum HOM05D007765 ORTHO05D009826 6.8e-10 67.8 65 55.4
Phvul.003G143700 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 8.8e-10 67.4 72 55.6
Glyma.13G098000 Glycine max HOM05D007765 ORTHO05D009826 1.2e-09 67.0 75 53.3
Carub.0003s3320 Capsella rubella HOM05D007765 ORTHO05D009826 2.0e-09 66.2 87 39.1
Medtr2g036670 Medicago truncatula HOM05D007765 ORTHO05D009826 2.6e-09 65.9 66 53.0
Glyma.15G162800 Glycine max HOM05D007765 ORTHO05D009826 3.4e-09 65.5 69 53.6
VMungo1309G2639 Vigna mungo HOM05D007765 ORTHO05D009826 3.4e-09 65.5 64 54.7
Lalb_Chr12g0199471 Lupinus albus HOM05D007765 ORTHO05D009826 4.4e-09 65.1 67 58.2
Lj6g0023329 Lotus japonicus HOM05D007765 ORTHO05D009826 5.7e-09 64.7 71 53.5
Glyma.17G061700 Glycine max HOM05D007765 ORTHO05D009826 9.8e-09 63.9 73 53.4
Phvul.009G238800 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 1.3e-08 63.5 65 55.4
BcaB07g31628 Brassica carinata HOM05D007765 ORTHO05D009826 3.7e-08 62.0 113 34.5
Lalb_Chr18g0052451 Lupinus albus HOM05D007765 ORTHO05D009826 4.9e-08 61.6 79 46.8
BolC9t54340H Brassica oleracea HOM05D007765 ORTHO05D009826 6.3e-08 61.2 114 33.3
A09p12150 Brassica napus HOM05D007765 ORTHO05D009826 1.1e-07 60.5 114 32.5
C09p14370 Brassica napus HOM05D007765 ORTHO05D009826 1.1e-07 60.5 114 32.5
BraA09t36859Z Brassica rapa HOM05D007765 ORTHO05D009826 1.1e-07 60.5 114 32.5
Glyma.09G056600 Glycine max HOM05D007765 ORTHO05D009826 1.1e-07 60.5 71 50.7
BcaC04g22872 Brassica carinata HOM05D007765 ORTHO05D009826 1.4e-07 60.1 114 33.3
AL3G52940 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 1.8e-07 59.7 68 45.6
arahy.Tifrunner.gnm1.ann1.YM1G3Q Arachis hypogaea HOM05D007765 ORTHO05D009826 3.1e-07 58.9 65 52.3
Thhalv10022885m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 4.1e-07 58.5 110 32.7
AT2G18969 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 5.4e-07 58.2 68 44.1
Lalb_Chr20g0116301 Lupinus albus HOM05D007765 ORTHO05D009826 5.4e-07 58.2 63 46.0
Sp3g32420 Schrenkiella parvula HOM05D007765 ORTHO05D009826 9.2e-07 57.4 115 30.4
CARHR109510 Cardamine hirsuta HOM05D007765 ORTHO05D009826 1.2e-06 57.0 66 43.9
Sed0013776 Sechium edule HOM05D007765 ORTHO05D009826 2.0e-06 56.2 61 49.2
ClCG11G011990 Citrullus lanatus HOM05D007765 ORTHO05D009826 2.7e-06 55.8 71 47.9
AL7G22010 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 5.9e-06 54.7 112 33.9


User provided reference genes

Program Settings