Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g082040 Medicago truncatula HOM05D002545 ORTHO05D002335 6.6e-46 186.8 82 100.0
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 7.6e-10 67.0 55 58.2
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-07 58.9 78 37.2
Medtr5g036930 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-07 58.9 68 47.1
SGA_v2.0_scaffold147G36377 Striga asiatica HOM05D000003 ORTHO05D000022 2.7e-07 58.5 72 31.9
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.5e-07 58.2 78 37.2
Lj4g0002379 Lotus japonicus HOM05D000003 ORTHO05D000022 4.6e-07 57.8 67 37.3
Thecc.06G025800 Theobroma cacao HOM05D000003 ORTHO05D000022 4.6e-07 57.8 66 39.4
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-06 56.6 78 37.2
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 2.3e-06 55.5 69 33.3
RcHm_v2.0_Chr4g0437331 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-06 54.7 68 39.7
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 8.7e-06 53.5 66 34.8


User provided reference genes

Program Settings