Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.3e-241 839.3 422 100.0
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.0e-191 672.5 405 84.7
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 5.9e-191 671.0 420 81.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.6e-172 609.8 364 83.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 6.8e-171 604.4 413 72.9
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 4.1e-168 595.1 413 71.2
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 2.1e-167 592.8 413 70.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.3e-166 590.1 413 70.7
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.3e-166 590.1 413 74.3
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.3e-166 589.3 413 73.6
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 5.1e-166 588.2 413 69.7
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 6.9e-163 577.8 422 67.5
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 9.0e-163 577.4 400 70.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 2.0e-162 576.2 412 68.9
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 7.6e-162 574.3 412 68.7
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 4.9e-161 571.6 414 67.1
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 6.4e-161 571.2 400 70.0
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.6e-159 566.6 413 66.8
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.7e-158 563.1 414 66.7
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 3.9e-158 562.0 415 65.1
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.1e-158 561.6 415 64.8
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 8.7e-158 560.8 413 66.8
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.5e-157 560.1 413 67.1
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.9e-157 559.7 412 66.3
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 4.3e-157 558.5 400 67.5
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 9.6e-157 557.4 411 65.5
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 9.6e-157 557.4 414 65.2
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.3e-156 557.0 411 65.5
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.3e-156 557.0 422 65.2
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.3e-156 557.0 411 66.4
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.1e-156 556.2 413 66.3
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 2.1e-156 556.2 402 66.4
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.8e-156 555.8 413 66.1
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 8.1e-156 554.3 421 65.3
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.1e-156 554.3 413 64.6
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.1e-155 553.9 416 64.9
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.4e-155 553.5 402 68.2
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 3.1e-155 552.4 415 65.1
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.0e-155 552.0 413 64.4
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 9.0e-155 550.8 413 65.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 9.0e-155 550.8 413 65.6
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 1.2e-154 550.4 413 64.6
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.5e-154 550.1 413 65.4
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.5e-154 550.1 413 65.4
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 2.6e-154 549.3 413 65.4
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.6e-154 549.3 413 64.2
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 3.4e-154 548.9 413 65.9
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 4.5e-154 548.5 413 65.4
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 9.9e-154 547.4 415 63.9
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.3e-153 547.0 399 64.7
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.1e-152 543.9 424 62.5
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.4e-152 542.7 415 62.2
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 5.4e-152 541.6 422 63.5
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 7.1e-152 541.2 423 63.6
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 3.5e-151 538.9 425 61.6
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 6.0e-151 538.1 415 61.9
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 6.0e-151 538.1 414 62.8
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 6.0e-151 538.1 425 61.2
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.3e-150 537.0 411 65.2
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.3e-150 537.0 412 62.4
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.3e-150 536.2 425 61.2
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 3.9e-150 535.4 411 63.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.1e-149 533.9 411 63.7
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.3e-149 532.3 407 63.9
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 1.3e-148 530.4 440 59.8
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.6e-148 530.0 418 62.9
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.6e-148 530.0 425 61.2
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 8.1e-148 527.7 414 65.0
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.4e-147 526.9 418 62.9
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 3.1e-147 525.8 402 62.2
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 6.9e-147 524.6 392 65.1
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.5e-146 523.5 405 62.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.5e-146 523.5 412 61.4
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.5e-146 523.5 413 62.5
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 2.6e-146 522.7 413 62.7
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 3.4e-146 522.3 412 61.9
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.4e-146 522.3 415 61.9
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 2.9e-145 519.2 402 62.4
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.4e-144 516.2 415 61.2
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.1e-142 508.4 413 61.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 2.5e-141 506.1 411 58.4
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.8e-139 500.0 424 59.9
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.7e-137 493.4 407 61.2
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.2e-137 493.0 529 50.9
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 4.2e-136 488.8 423 57.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.3e-134 483.8 458 55.5
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 6.5e-129 464.9 453 53.4
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 8.5e-129 464.5 403 58.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.6e-127 460.3 429 54.3
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 2.3e-126 456.4 395 59.0
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 2.8e-116 422.9 313 66.5
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 4.5e-114 415.6 314 64.6
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 2.8e-108 396.4 367 57.2
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.2e-95 354.4 413 48.7
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 2.8e-79 300.1 357 39.2
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 4.3e-72 276.2 197 62.4
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 5.8e-69 265.8 204 64.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.7e-68 264.2 355 39.4
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 8.3e-68 261.9 203 61.6
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.0e-65 255.0 345 38.6
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 1.6e-58 231.1 363 34.2
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 6.9e-46 189.1 285 36.1
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 6.4e-36 156.0 106 67.9
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.4e-30 138.3 101 62.4
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.8e-30 137.9 86 75.6
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 9.9e-29 132.1 104 59.6
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 9.9e-29 132.1 104 59.6
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 4.9e-28 129.8 101 59.4
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.0e-25 122.1 125 51.2
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.2e-07 61.2 50 62.0
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 3.7e-07 60.5 57 56.1
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.4e-06 58.5 50 60.0
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.8e-06 58.2 51 56.9


User provided reference genes

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