Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g075730 Medicago truncatula HOM05D025177 ORTHO05D036774 3.0e-60 235.0 117 100.0
Medtr2g075640 Medicago truncatula HOM05D025177 ORTHO05D036774 1.3e-58 229.6 117 98.3
TPR.G27445 Trifolium pratense HOM05D025177 ORTHO05D036774 5.0e-39 164.5 123 76.4
Phvul.005G080200 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 2.1e-21 105.9 122 52.5
Phvul.005G080400 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 8.9e-20 100.5 120 51.7
Glyma.13G267700 Glycine max HOM05D000405 ORTHO05D000712 2.6e-19 99.0 123 52.8
Glyma.13G267400 Glycine max HOM05D000405 ORTHO05D000712 4.4e-19 98.2 120 51.7
Glyma.13G267600 Glycine max HOM05D000405 ORTHO05D000712 7.5e-19 97.4 125 48.0
arahy.Tifrunner.gnm1.ann1.AI43ZL Arachis hypogaea HOM05D000405 ORTHO05D000712 6.4e-18 94.4 115 51.3
arahy.Tifrunner.gnm1.ann1.B4MGNH Arachis hypogaea HOM05D000405 ORTHO05D000712 6.4e-18 94.4 111 53.2
VMungo1080G1479 Vigna mungo HOM05D000405 ORTHO05D000712 4.1e-17 91.7 104 54.8
Glyma.13G267500 Glycine max HOM05D000405 ORTHO05D000712 7.3e-14 80.9 121 46.3
Phvul.005G080300 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 1.4e-12 76.6 128 46.1
VMungo1080G0807 Vigna mungo HOM05D000405 ORTHO05D000712 3.1e-12 75.5 130 43.1
VMungo1080G0641 Vigna mungo HOM05D000405 ORTHO05D000712 4.0e-12 75.1 102 43.1
Psat5g236480 Pisum sativum HOM05D000405 ORTHO05D000712 8.9e-12 73.9 127 40.9
TPR.G16071 Trifolium pratense HOM05D025177 ORTHO05D000712 8.9e-12 73.9 135 38.5
Medtr2g075700 Medicago truncatula HOM05D000405 ORTHO05D000712 1.5e-11 73.2 124 41.9
Medtr2g075680 Medicago truncatula HOM05D000405 ORTHO05D000712 2.0e-11 72.8 110 43.6
Glyma.09G274000 Glycine max HOM05D000405 ORTHO05D000712 8.3e-10 67.4 119 43.7
Medtr2g075690 Medicago truncatula HOM05D000405 ORTHO05D000712 8.3e-10 67.4 128 44.5
Glyma.16G219800 Glycine max HOM05D000405 ORTHO05D000712 1.9e-09 66.2 108 41.7
Phvul.010G057900 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 2.4e-09 65.9 109 41.3
arahy.Tifrunner.gnm1.ann1.CLQ0AV Arachis hypogaea HOM05D000405 ORTHO05D000712 3.2e-09 65.5 101 43.6
TPR.G16055 Trifolium pratense HOM05D000405 ORTHO05D000712 3.2e-09 65.5 127 39.4
Psat5g236520 Pisum sativum HOM05D000405 ORTHO05D000712 1.6e-08 63.2 125 38.4
arahy.Tifrunner.gnm1.ann1.MEK3S1 Arachis hypogaea HOM05D000405 ORTHO05D000712 4.6e-08 61.6 83 44.6
arahy.Tifrunner.gnm1.ann1.FUL0ZC Arachis hypogaea HOM05D000405 ORTHO05D000712 6.0e-08 61.2 74 47.3
Lalb_Chr12g0210661 Lupinus albus HOM05D000405 ORTHO05D000712 6.0e-08 61.2 110 40.9
Lj3g0008288 Lotus japonicus HOM05D000405 ORTHO05D000712 1.0e-07 60.5 117 39.3
arahy.Tifrunner.gnm1.ann1.G08IM2 Arachis hypogaea HOM05D025177 ORTHO05D000712 1.7e-07 59.7 108 38.0
Psat0s4693g0040 Pisum sativum HOM05D000405 ORTHO05D000712 2.3e-07 59.3 119 34.5
Glyma.18G213200 Glycine max HOM05D000405 ORTHO05D000712 3.0e-07 58.9 110 38.2
Psat3g118040 Pisum sativum HOM05D000405 ORTHO05D000712 6.6e-07 57.8 120 35.8
TPR.G31251 Trifolium pratense HOM05D000405 ORTHO05D000712 8.6e-07 57.4 125 36.0
arahy.Tifrunner.gnm1.ann1.CE0NJE Arachis hypogaea HOM05D000405 ORTHO05D000712 1.5e-06 56.6 65 47.7
Psat5g236440 Pisum sativum HOM05D000405 ORTHO05D000712 1.5e-06 56.6 124 37.1
Medtr7g073380 Medicago truncatula HOM05D000405 ORTHO05D000712 2.5e-06 55.8 119 36.1
Medtr7g073430 Medicago truncatula HOM05D000405 ORTHO05D000712 2.5e-06 55.8 120 35.8
Ca_07765_v3 Cicer arietinum L. HOM05D000405 ORTHO05D000712 3.3e-06 55.5 125 34.4
Phvul.008G081800 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 3.3e-06 55.5 117 35.9
arahy.Tifrunner.gnm1.ann1.P38DLX Arachis hypogaea HOM05D000405 ORTHO05D000712 4.3e-06 55.1 65 47.7


User provided reference genes

Program Settings