Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g075640 Medicago truncatula HOM05D025177 ORTHO05D036774 1.8e-60 235.7 117 100.0
Medtr2g075730 Medicago truncatula HOM05D025177 ORTHO05D036774 7.4e-59 230.3 117 98.3
TPR.G27445 Trifolium pratense HOM05D025177 ORTHO05D036774 2.3e-39 165.6 123 76.4
Phvul.005G080200 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 2.1e-21 105.9 122 52.5
Phvul.005G080400 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 3.1e-20 102.1 120 52.5
Glyma.13G267700 Glycine max HOM05D000405 ORTHO05D000712 6.8e-20 100.9 123 53.7
Glyma.13G267400 Glycine max HOM05D000405 ORTHO05D000712 1.5e-19 99.8 120 52.5
Glyma.13G267600 Glycine max HOM05D000405 ORTHO05D000712 4.4e-19 98.2 125 48.0
arahy.Tifrunner.gnm1.ann1.B4MGNH Arachis hypogaea HOM05D000405 ORTHO05D000712 8.3e-18 94.0 113 54.9
arahy.Tifrunner.gnm1.ann1.AI43ZL Arachis hypogaea HOM05D000405 ORTHO05D000712 1.1e-17 93.6 117 53.0
VMungo1080G1479 Vigna mungo HOM05D000405 ORTHO05D000712 4.1e-17 91.7 104 54.8
Glyma.13G267500 Glycine max HOM05D000405 ORTHO05D000712 1.9e-14 82.8 121 47.1
Phvul.005G080300 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 8.1e-13 77.4 128 46.1
VMungo1080G0807 Vigna mungo HOM05D000405 ORTHO05D000712 1.8e-12 76.3 130 43.1
Medtr2g075680 Medicago truncatula HOM05D000405 ORTHO05D000712 5.2e-12 74.7 110 44.5
Psat5g236480 Pisum sativum HOM05D000405 ORTHO05D000712 6.8e-12 74.3 127 40.9
Medtr2g075700 Medicago truncatula HOM05D000405 ORTHO05D000712 8.9e-12 73.9 124 41.9
VMungo1080G0641 Vigna mungo HOM05D000405 ORTHO05D000712 8.9e-12 73.9 102 43.1
TPR.G16071 Trifolium pratense HOM05D025177 ORTHO05D000712 1.5e-11 73.2 135 38.5
Glyma.09G274000 Glycine max HOM05D000405 ORTHO05D000712 6.4e-10 67.8 119 43.7
Medtr2g075690 Medicago truncatula HOM05D000405 ORTHO05D000712 6.4e-10 67.8 128 44.5
Glyma.16G219800 Glycine max HOM05D000405 ORTHO05D000712 1.4e-09 66.6 109 44.0
TPR.G16055 Trifolium pratense HOM05D000405 ORTHO05D000712 5.4e-09 64.7 128 41.4
Phvul.010G057900 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 7.1e-09 64.3 109 41.3
arahy.Tifrunner.gnm1.ann1.CLQ0AV Arachis hypogaea HOM05D000405 ORTHO05D000712 9.2e-09 63.9 101 42.6
Lalb_Chr12g0210661 Lupinus albus HOM05D000405 ORTHO05D000712 1.0e-07 60.5 110 40.9
Psat5g236520 Pisum sativum HOM05D000405 ORTHO05D000712 1.0e-07 60.5 125 38.4
Psat0s4693g0040 Pisum sativum HOM05D000405 ORTHO05D000712 1.3e-07 60.1 119 34.5
arahy.Tifrunner.gnm1.ann1.FUL0ZC Arachis hypogaea HOM05D000405 ORTHO05D000712 1.7e-07 59.7 74 45.9
arahy.Tifrunner.gnm1.ann1.MEK3S1 Arachis hypogaea HOM05D000405 ORTHO05D000712 1.7e-07 59.7 83 43.4
Glyma.18G213200 Glycine max HOM05D000405 ORTHO05D000712 2.3e-07 59.3 113 39.8
Lj3g0008288 Lotus japonicus HOM05D000405 ORTHO05D000712 3.9e-07 58.5 117 41.0
arahy.Tifrunner.gnm1.ann1.G08IM2 Arachis hypogaea HOM05D025177 ORTHO05D000712 5.1e-07 58.2 108 37.0
Psat3g118040 Pisum sativum HOM05D000405 ORTHO05D000712 5.1e-07 58.2 120 35.8
TPR.G31251 Trifolium pratense HOM05D000405 ORTHO05D000712 8.6e-07 57.4 125 36.0
Medtr7g073380 Medicago truncatula HOM05D000405 ORTHO05D000712 1.1e-06 57.0 115 34.8
Psat5g236440 Pisum sativum HOM05D000405 ORTHO05D000712 1.1e-06 57.0 124 37.1
Medtr7g073430 Medicago truncatula HOM05D000405 ORTHO05D000712 3.3e-06 55.5 120 35.0
arahy.Tifrunner.gnm1.ann1.CE0NJE Arachis hypogaea HOM05D000405 ORTHO05D000712 4.3e-06 55.1 65 46.2
Phvul.008G081800 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 7.3e-06 54.3 117 35.9


User provided reference genes

Program Settings