Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g074890 Medicago truncatula HOM05D026100 ORTHO05D000007 3.4e-275 951.0 478 100.0
Medtr3g465210 Medicago truncatula HOM05D026100 ORTHO05D000007 6.1e-67 259.2 300 51.7
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 6.5e-61 239.2 565 34.0
Medtr1g093780 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-54 217.6 559 34.3
Medtr4g020650 Medicago truncatula HOM05D026100 ORTHO05D000007 4.7e-43 179.9 260 46.9
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 8.6e-37 159.1 92 73.9
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 4.6e-30 136.7 87 65.5
Medtr6g004090 Medicago truncatula HOM05D026100 ORTHO05D000007 1.0e-29 135.6 316 36.7
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 7.3e-28 129.4 99 54.5
Medtr0014s0120 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-27 127.9 89 61.8
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 8.9e-26 122.5 91 54.9
Medtr6g076110 Medicago truncatula HOM05D001538 ORTHO05D000007 9.9e-25 119.0 80 63.8
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-21 108.6 91 46.2
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 5.1e-21 106.7 91 48.4
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 1.1e-20 105.5 89 47.2
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-20 104.0 89 48.3
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-20 104.0 89 48.3
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-20 104.0 92 46.7
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 7.3e-20 102.8 93 41.9
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.1e-19 101.3 99 45.5
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 2.8e-19 100.9 110 41.8
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-19 100.9 107 41.1
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-19 100.9 93 41.9
FvH4_2g29541 Fragaria vesca HOM05D001538 ORTHO05D000007 4.7e-19 100.1 91 46.2
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 6.2e-19 99.8 92 43.5
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 6.2e-19 99.8 86 46.5
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 8.1e-19 99.4 100 43.0
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 1.1e-18 99.0 91 44.0
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-18 99.0 91 45.1
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.4e-18 98.6 91 46.2
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-18 98.2 89 43.8
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 4.0e-18 97.1 92 43.5
Medtr7g063160 Medicago truncatula HOM05D001538 ORTHO05D000007 6.9e-18 96.3 89 47.2
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 8.9e-18 95.9 89 42.7
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-17 95.5 100 46.0
Medtr0063s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-17 94.7 97 40.2
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-17 94.7 92 41.3
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-17 94.4 91 41.8
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-17 94.0 95 38.9
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 5.8e-17 93.2 98 45.9
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 7.6e-17 92.8 91 36.3
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 9.9e-17 92.4 98 41.8
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 9.9e-17 92.4 94 41.5
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 9.9e-17 92.4 99 37.4
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 9.9e-17 92.4 93 40.9
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 1.3e-16 92.0 92 43.5
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 1.3e-16 92.0 300 25.7
Medtr2g064630 Medicago truncatula HOM05D001538 ORTHO05D000007 3.8e-16 90.5 65 55.4
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 3.8e-16 90.5 91 40.7
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 3.8e-16 90.5 91 37.4
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 4.9e-16 90.1 91 42.9
FvH4_7g18611 Fragaria vesca HOM05D001538 ORTHO05D000007 8.4e-16 89.4 91 40.7
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 8.4e-16 89.4 89 40.4
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-15 89.0 94 42.6
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 1.1e-15 89.0 91 41.8
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-15 88.6 98 39.8
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 1.4e-15 88.6 100 42.0
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 1.4e-15 88.6 100 42.0
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-15 88.6 91 38.5
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-15 88.2 89 41.6
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-15 87.8 103 39.8
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 4.2e-15 87.0 106 40.6
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 4.2e-15 87.0 89 41.6
Medtr1g033070 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-15 86.7 98 41.8
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 9.3e-15 85.9 100 41.0
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 9.3e-15 85.9 93 39.8
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 9.3e-15 85.9 98 39.8
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-14 85.1 89 40.4
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 2.1e-14 84.7 91 38.5
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 2.1e-14 84.7 94 41.5
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-14 84.7 91 44.0
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-14 84.7 90 38.9
Medtr6g042480 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-14 84.3 90 36.7
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 3.5e-14 84.0 94 37.2
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 4.6e-14 83.6 94 42.6
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 4.6e-14 83.6 84 40.5
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 6.0e-14 83.2 91 38.5
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 7.8e-14 82.8 78 43.6
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-13 82.4 84 39.3
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.3e-13 81.3 167 30.5
Medtr2g048290 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-13 81.3 85 42.4
Psat5g123120 Pisum sativum HOM05D001538 ORTHO05D000007 3.0e-13 80.9 91 37.4
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.9e-13 80.5 87 40.2
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 5.1e-13 80.1 83 48.2
Medtr8g069240 Medicago truncatula HOM05D001538 ORTHO05D000007 6.6e-13 79.7 80 41.2
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-12 79.0 89 38.2
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 1.1e-12 79.0 100 39.0
Medtr3g086820 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-12 78.2 89 38.2
Psat4g149040 Pisum sativum HOM05D001538 ORTHO05D000007 1.9e-12 78.2 115 37.4
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 3.3e-12 77.4 92 37.0
Medtr5g024590 Medicago truncatula HOM05D001538 ORTHO05D000007 9.6e-12 75.9 66 47.0
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 1.3e-11 75.5 71 40.8
Medtr2g034230 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-11 75.5 71 45.1
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-11 75.1 68 39.7
TPR.G7611 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-11 75.1 65 44.6
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-11 74.7 71 42.3
Medtr5g037100 Medicago truncatula HOM05D001538 ORTHO05D000007 2.8e-11 74.3 91 35.2
Medtr3g464250 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-11 73.9 74 40.5
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-11 73.9 67 46.3
TPR.G37617 Trifolium pratense HOM05D001538 ORTHO05D000007 3.6e-11 73.9 71 38.0
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 4.8e-11 73.6 90 33.3
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 6.2e-11 73.2 92 30.4
Medtr7g063750 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-11 73.2 70 44.3
Medtr2g013990 Medicago truncatula HOM05D001538 ORTHO05D000007 8.1e-11 72.8 44 59.1
Medtr7g083320 Medicago truncatula HOM05D050532 ORTHO05D000007 1.1e-10 72.4 116 47.4
TPR.G22375 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-10 72.4 74 43.2
TPR.G4426 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-10 72.4 59 44.1
Medtr1024s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-10 72.0 56 48.2
Psat4g074680 Pisum sativum HOM05D001538 ORTHO05D000007 1.8e-10 71.6 75 40.0
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 1.8e-10 71.6 70 42.9
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 1.8e-10 71.6 283 22.6
Lj9A98T13 Lonicera japonica HOM05D010180 ORTHO05D000007 3.1e-10 70.9 104 40.4
Phvul.011G112766 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.9e-10 69.7 89 38.2
Medtr2g031910 Medicago truncatula HOM05D001538 ORTHO05D000007 9.0e-10 69.3 45 48.9
Medtr3g050340 Medicago truncatula HOM05D001538 ORTHO05D000007 9.0e-10 69.3 69 37.7
Medtr7g018490 Medicago truncatula HOM05D001538 ORTHO05D000007 9.0e-10 69.3 54 48.1
TPR.G576 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-09 68.2 67 41.8
Medtr3g465060 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-09 67.4 75 37.3
Medtr4g009745 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-09 67.4 57 59.6
Medtr8g045340 Medicago truncatula HOM05D001538 ORTHO05D000007 4.5e-09 67.0 68 42.6
Medtr6g043680 Medicago truncatula HOM05D001538 ORTHO05D000007 5.8e-09 66.6 73 35.6
Phvul.009G209000 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 5.8e-09 66.6 98 30.6
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 7.6e-09 66.2 81 40.7
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 9.9e-09 65.9 46 56.5
Psat7g193320 Pisum sativum HOM05D001538 ORTHO05D000007 1.3e-08 65.5 67 44.8
Medtr5g047910 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-08 65.1 65 43.1
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 2.2e-08 64.7 90 31.1
Medtr2g054220 Medicago truncatula HOM05D001538 ORTHO05D000007 2.2e-08 64.7 44 43.2
TPR.G27759 Trifolium pratense HOM05D001538 ORTHO05D000007 3.8e-08 63.9 93 33.3
Medtr5g028970 Medicago truncatula HOM05D027863 ORTHO05D000007 6.4e-08 63.2 107 38.3
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 8.4e-08 62.8 78 38.5
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 8.4e-08 62.8 91 28.6
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 8.4e-08 62.8 75 38.7
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 8.4e-08 62.8 58 48.3
TPR.G21276 Trifolium pratense HOM05D001538 ORTHO05D000007 1.4e-07 62.0 54 44.4
Aqoxy4G00948 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.9e-07 61.6 80 36.2
Aqoxy2G01417 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.4e-07 61.2 68 33.8
Lj1P491T18 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-07 61.2 92 28.3
Medtr1g062320 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-07 61.2 44 47.7
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-07 61.2 67 37.3
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.4e-07 61.2 65 40.0
Aqoxy5G00984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 3.2e-07 60.8 92 30.4
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 3.2e-07 60.8 102 27.5
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 7.1e-07 59.7 67 43.3
Medtr1g032820 Medicago truncatula HOM05D001538 ORTHO05D000007 7.1e-07 59.7 54 50.0
Medtr5g034920 Medicago truncatula HOM05D001538 ORTHO05D000007 7.1e-07 59.7 52 50.0
Medtr5g065660 Medicago truncatula HOM05D001538 ORTHO05D000007 7.1e-07 59.7 78 33.3
TPR.G25048 Trifolium pratense HOM05D001538 ORTHO05D000007 7.1e-07 59.7 82 32.9
Aqoxy3G02984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 9.3e-07 59.3 93 32.3
Medtr4g031785 Medicago truncatula HOM05D001538 ORTHO05D000007 9.3e-07 59.3 42 52.4
Medtr3g079805 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-06 58.9 46 47.8
Medtr6g038330 Medicago truncatula HOM05D041717 ORTHO05D000007 1.6e-06 58.5 44 45.5
Phvul.004G102600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.6e-06 58.5 59 44.1
TPR.G27799 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-06 58.5 65 41.5
TPR.G25855 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-06 58.2 51 49.0
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 3.5e-06 57.4 52 44.2
Medtr5g060720 Medicago truncatula HOM05D001538 ORTHO05D000007 4.6e-06 57.0 38 50.0
Lalb_Chr07g0194691 Lupinus albus HOM05D001538 ORTHO05D000007 6.0e-06 56.6 49 44.9
Lalb_Chr10g0106351 Lupinus albus HOM05D001538 ORTHO05D000007 6.0e-06 56.6 47 53.2
Medtr4g031410 Medicago truncatula HOM05D001538 ORTHO05D000007 6.0e-06 56.6 34 55.9
Medtr4g031755 Medicago truncatula HOM05D001538 ORTHO05D000007 6.0e-06 56.6 34 55.9
Psat1g141600 Pisum sativum HOM05D001538 ORTHO05D000007 6.0e-06 56.6 60 40.0
TPR.G39587 Trifolium pratense HOM05D001538 ORTHO05D000007 7.9e-06 56.2 46 47.8


User provided reference genes

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