Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g072710 Medicago truncatula HOM05D000051 ORTHO05D000015 7.6e-104 380.6 199 100.0
TPR.G16797 Trifolium pratense HOM05D000051 ORTHO05D000015 1.5e-59 233.4 177 71.8
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 4.4e-59 231.9 185 69.7
TPR.G16816 Trifolium pratense HOM05D000051 ORTHO05D000015 1.7e-58 229.9 179 68.2
Medtr2g072720 Medicago truncatula HOM05D000051 ORTHO05D000015 2.4e-57 226.1 186 65.6
Medtr4g032845 Medicago truncatula HOM05D000051 ORTHO05D000015 5.3e-49 198.4 181 63.0
VMungo1080G0904 Vigna mungo HOM05D000051 ORTHO05D000015 4.5e-48 195.3 181 58.0
Glyma.17G194900 Glycine max HOM05D000051 ORTHO05D000015 5.9e-48 194.9 180 61.1
Glyma.13G263100 Glycine max HOM05D000051 ORTHO05D000015 1.5e-46 190.3 196 55.1
TPR.G16810 Trifolium pratense HOM05D000051 ORTHO05D000015 2.1e-45 186.4 177 58.2
Lj1g0022871 Lotus japonicus HOM05D000051 ORTHO05D000015 6.7e-44 181.4 179 59.2
arahy.Tifrunner.gnm1.ann1.NSP7CP Arachis hypogaea HOM05D000051 ORTHO05D000015 2.0e-43 179.9 188 52.7
TPR.G29389 Trifolium pratense HOM05D000051 ORTHO05D000015 4.4e-43 178.7 213 52.1
arahy.Tifrunner.gnm1.ann1.AI520R Arachis hypogaea HOM05D000051 ORTHO05D000015 2.2e-42 176.4 178 55.6
arahy.Tifrunner.gnm1.ann1.U4L8N2 Arachis hypogaea HOM05D000051 ORTHO05D000015 8.2e-42 174.5 178 55.6
arahy.Tifrunner.gnm1.ann1.L5GG2G Arachis hypogaea HOM05D000051 ORTHO05D000015 5.7e-35 151.8 179 48.6
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 9.8e-35 151.0 183 49.7
arahy.Tifrunner.gnm1.ann1.FIN1P6 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.8e-33 146.7 186 48.4
arahy.Tifrunner.gnm1.ann1.HYYB50 Arachis hypogaea HOM05D000051 ORTHO05D000015 3.5e-32 142.5 186 48.4
Lj2g0025192 Lotus japonicus HOM05D000051 ORTHO05D000015 5.0e-31 138.7 179 46.9
Medtr1g025870 Medicago truncatula HOM05D000051 ORTHO05D000015 9.5e-30 134.4 146 52.1
Lj2g0008890 Lotus japonicus HOM05D000051 ORTHO05D000015 8.0e-29 131.3 180 44.4
TPR.G3816 Trifolium pratense HOM05D000051 ORTHO05D000015 3.0e-28 129.4 120 62.5
Medtr2g072650 Medicago truncatula HOM05D000051 ORTHO05D000015 5.2e-28 128.6 179 45.8
TPR.G26409 Trifolium pratense HOM05D000051 ORTHO05D000015 2.0e-27 126.7 149 47.0
Medtr6g022350 Medicago truncatula HOM05D000051 ORTHO05D000015 4.4e-27 125.6 146 47.9
Medtr5g007090 Medicago truncatula HOM05D000051 ORTHO05D000015 2.8e-26 122.9 171 45.0
Glyma.17G193700 Glycine max HOM05D000051 ORTHO05D000015 8.3e-26 121.3 165 43.0
arahy.Tifrunner.gnm1.ann1.H22LZM Arachis hypogaea HOM05D000051 ORTHO05D000015 1.8e-25 120.2 135 51.1
Medtr5g007110 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-24 117.1 110 60.9
Medtr5g005700 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-24 116.7 181 46.4
Lj2g0017050 Lotus japonicus HOM05D000051 ORTHO05D000015 1.0e-23 114.4 175 42.9
Glyma.13G262900 Glycine max HOM05D000051 ORTHO05D000015 3.3e-22 109.4 169 40.2
TPR.G7505 Trifolium pratense HOM05D000051 ORTHO05D000015 5.6e-22 108.6 123 50.4
arahy.Tifrunner.gnm1.ann1.ELME12 Arachis hypogaea HOM05D002329 ORTHO05D000015 3.4e-19 99.4 134 45.5
Medtr1g115250 Medicago truncatula HOM05D000051 ORTHO05D000015 9.8e-19 97.8 150 44.0
TPR.G4055 Trifolium pratense HOM05D000051 ORTHO05D000015 3.7e-18 95.9 165 38.8
arahy.Tifrunner.gnm1.ann1.NZKQ1I Arachis hypogaea HOM05D000051 ORTHO05D000015 1.8e-17 93.6 86 59.3
Glyma.13G262800 Glycine max HOM05D000051 ORTHO05D000015 7.0e-17 91.7 165 38.2
Glyma.15G242200 Glycine max HOM05D000051 ORTHO05D000015 5.9e-16 88.6 185 35.1
Glyma.15G242400 Glycine max HOM05D000051 ORTHO05D000015 5.9e-16 88.6 186 34.9
Lj3g0005297 Lotus japonicus HOM05D000051 ORTHO05D000015 5.9e-16 88.6 155 36.1
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 5.9e-16 88.6 121 43.0
Lj3g0010579 Lotus japonicus HOM05D000051 ORTHO05D000015 1.7e-15 87.0 155 35.5
Medtr8g006910 Medicago truncatula HOM05D000051 ORTHO05D000015 3.0e-15 86.3 108 52.8
Ca_16248_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 3.9e-15 85.9 110 45.5
Medtr7g094030 Medicago truncatula HOM05D000051 ORTHO05D030175 3.9e-15 85.9 123 44.7
VMungo1080G1404 Vigna mungo HOM05D000051 ORTHO05D000015 2.5e-14 83.2 183 33.9
TPR.G16802 Trifolium pratense HOM05D000051 ORTHO05D000015 7.3e-14 81.6 183 31.7
Glyma.13G262700 Glycine max HOM05D000051 ORTHO05D000015 1.6e-13 80.5 192 31.8
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 1.6e-13 80.5 195 30.3
Medtr5g007130 Medicago truncatula HOM05D000051 ORTHO05D000015 2.1e-13 80.1 172 37.2
Medtr7g094050 Medicago truncatula HOM05D000051 ORTHO05D000015 4.7e-13 79.0 117 41.0
Lj3g0017701 Lotus japonicus HOM05D000051 ORTHO05D000015 6.2e-13 78.6 155 33.5
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 6.2e-13 78.6 175 30.9
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 8.0e-13 78.2 99 38.4
Phvul.005G065100 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 1.1e-12 77.8 183 33.3
Phvul.005G070500 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 1.8e-12 77.0 178 33.7
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 3.1e-12 76.3 183 31.7
Phvul.005G064900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 4.0e-12 75.9 154 33.1
VMungo1080G0675 Vigna mungo HOM05D000051 ORTHO05D000015 6.8e-12 75.1 154 34.4
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 8.9e-12 74.7 147 31.3
Medtr2g082880 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-11 73.6 113 39.8
Lj3g0000880 Lotus japonicus HOM05D000051 ORTHO05D000015 4.4e-11 72.4 146 34.2
Lj3g0027587 Lotus japonicus HOM05D000051 ORTHO05D000015 1.3e-10 70.9 132 34.8
TPR.G25974 Trifolium pratense HOM05D000051 ORTHO05D000015 1.3e-10 70.9 139 36.0
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 4.9e-10 68.9 155 36.1
Lj3g0017405 Lotus japonicus HOM05D000051 ORTHO05D000015 8.3e-10 68.2 120 35.0
Medtr3g018680 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-09 67.4 77 51.9
Medtr5g006480 Medicago truncatula HOM05D000051 ORTHO05D000015 1.9e-09 67.0 77 48.1
TPR.G16814 Trifolium pratense HOM05D000051 ORTHO05D000015 7.0e-09 65.1 46 76.1
Lj3g0014741 Lotus japonicus HOM05D000051 ORTHO05D000015 1.0e-07 61.2 168 28.6
TPR.G7205 Trifolium pratense HOM05D000051 ORTHO05D000015 1.0e-07 61.2 69 49.3
Medtr2g082800 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-07 60.8 131 35.9
Lalb_Chr03g0031401 Lupinus albus HOM05D000051 ORTHO05D000015 3.0e-07 59.7 126 34.9
vmacro11759 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 1.9e-06 57.0 166 27.7
Sc13g0005570 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.3e-06 56.2 125 32.0
Ca_03848_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 4.3e-06 55.8 129 31.8
AT5G53840 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.6e-06 55.5 115 33.0
Dinv17489 Davidia involucrata HOM05D000051 ORTHO05D000015 7.3e-06 55.1 156 32.7
Medtr4g130200 Medicago truncatula HOM05D000051 ORTHO05D000015 7.3e-06 55.1 124 34.7
RcHm_v2.0_Chr1g0363171 Rosa chinensis HOM05D000051 ORTHO05D000015 7.3e-06 55.1 152 26.3


User provided reference genes

Program Settings