Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 4.6e-88 327.8 156 100.0
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 2.8e-77 292.0 156 89.1
Medtr2g071790 Medicago truncatula HOM05D012055 ORTHO05D014183 6.4e-74 280.8 156 85.3
Medtr2g071740 Medicago truncatula HOM05D012055 ORTHO05D014183 6.2e-69 264.2 154 85.1
TPR.G26651 Trifolium pratense HOM05D012055 ORTHO05D014183 1.4e-65 253.1 158 77.2
TPR.G26637 Trifolium pratense HOM05D012055 ORTHO05D014183 1.3e-63 246.5 158 76.6
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 4.0e-60 235.0 158 76.6
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 8.4e-58 227.3 161 75.2
Psat1g009360 Pisum sativum HOM05D012055 ORTHO05D014183 7.1e-57 224.2 159 74.8
Glyma.13G260000 Glycine max HOM05D012055 ORTHO05D014183 5.0e-26 121.7 165 48.5
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 1.4e-25 120.2 169 48.5
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 2.1e-24 116.3 167 47.9
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 1.0e-23 114.0 159 45.9
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 1.2e-16 90.5 154 43.5
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 9.7e-14 80.9 133 48.1
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 2.9e-10 69.3 169 34.9
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 3.8e-10 68.9 150 34.7
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 3.8e-10 68.9 165 32.7
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 1.5e-09 67.0 115 40.9
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.5e-09 67.0 154 36.4
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 2.5e-09 66.2 144 33.3
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.2e-08 63.9 145 31.7
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 2.7e-08 62.8 149 33.6
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 4.7e-08 62.0 155 32.9
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 4.7e-08 62.0 143 37.8
COL.COLO4_17431 Corchorus olitorius HOM05D023069 ORTHO05D009674 3.0e-07 59.3 147 33.3
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 3.0e-07 59.3 137 32.8
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 4.0e-07 58.9 138 36.2
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 5.2e-07 58.5 149 30.9
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 5.2e-07 58.5 137 36.5
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 6.7e-07 58.2 138 36.2
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 6.7e-07 58.2 138 36.2
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 8.8e-07 57.8 138 36.2
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.2e-06 57.4 145 33.8
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.0e-06 56.6 172 29.1
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 2.6e-06 56.2 156 30.1
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.6e-06 56.2 150 30.0
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 5.7e-06 55.1 139 32.4
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 7.5e-06 54.7 155 31.0
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 9.7e-06 54.3 165 24.8


User provided reference genes

Program Settings