Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g068900 Medicago truncatula HOM05D002644 ORTHO05D003267 1.2e-39 166.0 81 100.0
Medtr8g019300 Medicago truncatula HOM05D002644 ORTHO05D003267 6.3e-33 143.7 81 85.2
Medtr8g019330 Medicago truncatula HOM05D002644 ORTHO05D018018 9.8e-26 119.8 66 86.4
Medtr2g068910 Medicago truncatula HOM05D002644 ORTHO05D003267 1.6e-20 102.4 58 82.8
Ca_19145_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 8.3e-17 90.1 76 52.6
SGA_v2.0_scaffold166G38311 Striga asiatica HOM05D002644 ORTHO05D003267 1.4e-16 89.4 79 49.4
Ca_17767_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-15 86.3 80 51.2
Ca_19517_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-15 86.3 76 52.6
Ca_03880_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.7e-15 85.1 80 48.8
Ca_04089_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.0e-15 84.0 79 49.4
Ca_14972_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.0e-15 84.0 79 48.1
Ca_20188_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.0e-15 84.0 79 48.1
Ca_23661_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.0e-15 84.0 79 49.4
Ca_02759_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.8e-15 83.6 79 48.1
Ca_05353_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.8e-15 83.6 79 48.1
Ca_12022_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.8e-15 83.6 80 48.8
Ca_12950_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.8e-15 83.6 79 48.1
Ca_23926_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.8e-15 83.6 79 50.6
Ca_26256_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.8e-15 83.6 79 48.1
Ca_05412_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.0e-14 83.2 81 50.6
Lj4g0022111 Lotus japonicus HOM05D019175 ORTHO05D018974 1.0e-14 83.2 73 49.3
Ca_13656_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.3e-14 82.8 79 48.1
Ca_02982_v3 Cicer arietinum L. HOM05D000775 ORTHO05D003267 1.7e-14 82.4 76 51.3
Ca_02682_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.3e-14 82.0 76 51.3
Ca_07906_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.3e-14 82.0 79 48.1
Ca_13947_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.3e-14 82.0 80 47.5
Ca_19131_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.3e-14 82.0 79 46.8
Lj2g0002143 Lotus japonicus HOM05D002644 ORTHO05D003267 2.3e-14 82.0 74 50.0
Ca_07459_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.0e-14 81.6 80 50.0
Ca_02221_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Ca_04791_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Ca_06768_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Ca_12722_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Ca_13655_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Ca_18593_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Ca_19281_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-14 81.3 79 46.8
Medtr1g040750 Medicago truncatula HOM05D002644 ORTHO05D003267 3.9e-14 81.3 75 49.3
Ca_02610_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.0e-14 80.9 79 46.8
Ca_03120_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.0e-14 80.9 76 50.0
Ca_11988_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.0e-14 80.9 79 48.1
Ca_04436_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.6e-14 80.5 75 49.3
Ca_23735_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.6e-14 80.5 79 46.8
Lj4g0024195 Lotus japonicus HOM05D002644 ORTHO05D003267 6.6e-14 80.5 75 49.3
Ca_02190_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 8.6e-14 80.1 79 46.8
Ca_23938_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 8.6e-14 80.1 79 46.8
VMungo0464G0148 Vigna mungo HOM05D002644 ORTHO05D003267 8.6e-14 80.1 78 46.2
Ca_03865_v3 Cicer arietinum L. HOM05D002644 ORTHO05D010767 1.1e-13 79.7 75 50.7
Ca_20386_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.1e-13 79.7 79 45.6
Ca_06949_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.5e-13 79.3 79 46.8
Ca_11936_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.5e-13 79.3 79 48.1
Ca_13692_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.5e-13 79.3 73 52.1
Ca_19789_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.9e-13 79.0 80 46.2
Ca_30345_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.9e-13 79.0 76 48.7
VMungo1127G1915 Vigna mungo HOM05D002644 ORTHO05D003267 1.9e-13 79.0 74 48.6
Ca_10491_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.5e-13 78.6 79 45.6
Ca_05401_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.3e-13 78.2 80 47.5
Ca_19885_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.3e-13 78.2 80 47.5
Ca_07365_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.3e-13 77.8 79 46.8
Ca_08904_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.3e-13 77.8 79 45.6
Ca_02015_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.6e-13 77.4 73 47.9
Ca_06850_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.6e-13 77.4 76 50.0
Ca_19728_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.6e-13 77.4 76 47.4
Lj2g0011283 Lotus japonicus HOM05D002644 ORTHO05D003267 5.6e-13 77.4 75 48.0
Ca_05298_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.3e-13 77.0 76 48.7
Ca_12480_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.3e-13 77.0 76 48.7
Ca_13592_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 9.5e-13 76.6 75 48.0
Ca_01665_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-12 76.3 79 46.8
Ca_02465_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-12 76.3 80 45.0
Ca_03595_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-12 76.3 76 47.4
Ca_07291_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-12 76.3 76 48.7
Ca_04969_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.6e-12 75.9 79 45.6
Ca_02337_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.1e-12 75.5 79 46.8
Ca_03261_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.1e-12 75.5 76 46.1
Ca_05191_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.1e-12 75.5 76 48.7
SGA_v2.0_scaffold191G40501 Striga asiatica HOM05D002644 ORTHO05D003267 2.8e-12 75.1 66 48.5
Ca_02226_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.6e-12 74.7 66 53.0
Ca_18129_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.2e-12 73.9 73 45.2
Ca_03262_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.4e-11 72.8 66 50.0
Ca_28456_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.4e-11 72.8 79 43.0
Ca_04468_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.8e-11 72.4 68 47.1
Lj2g0011920 Lotus japonicus HOM05D002644 ORTHO05D003267 1.8e-11 72.4 74 43.2
Ca_03238_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.1e-11 71.6 71 46.5
Ca_03614_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.0e-11 71.2 66 50.0
Ca_02681_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.2e-11 70.9 64 51.6
Ca_03596_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.2e-11 70.9 76 44.7
Ca_05295_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.8e-11 70.5 67 53.7
Lj5g0023813 Lotus japonicus HOM05D002644 ORTHO05D003267 6.8e-11 70.5 76 43.4
Ca_11990_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.5e-10 69.3 71 47.9
Lj1g0000901 Lotus japonicus HOM05D002644 ORTHO05D003267 2.6e-10 68.6 76 42.1
Ca_13945_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.5e-10 67.0 73 45.2
Ca_23016_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.5e-10 67.0 66 45.5
Ca_20633_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 9.9e-10 66.6 66 47.0
AUR62031308 Chenopodium quinoa HOM05D002644 ORTHO05D003267 1.7e-09 65.9 78 41.0
Ca_19122_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.2e-09 65.5 66 47.0
Ca_27148_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.9e-09 65.1 63 49.2
Ca_27214_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.9e-09 65.1 65 46.2
Lalb_Chr22g0359551 Lupinus albus HOM05D002644 ORTHO05D003267 2.9e-09 65.1 73 43.8
TPR.G36418 Trifolium pratense HOM05D002644 ORTHO05D003267 3.7e-09 64.7 71 40.8
Ca_26622_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.1e-08 63.2 67 46.3
Ca_03119_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.4e-08 62.8 61 49.2
VMungo0647G1939 Vigna mungo HOM05D002644 ORTHO05D003267 1.9e-08 62.4 64 46.9
AUR62028503 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.2e-08 61.6 71 38.0
Ca_14284_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.1e-08 61.2 62 46.8
Lalb_Chr15g0082691 Lupinus albus HOM05D002644 ORTHO05D003267 9.2e-08 60.1 73 42.5
Lalb_Chr19g0127921 Lupinus albus HOM05D002644 ORTHO05D003267 9.2e-08 60.1 71 45.1
Ca_07064_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-07 59.7 62 43.5
Ca_27815_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.2e-07 59.7 60 51.7
Ca_27399_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.6e-07 59.3 59 49.2
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 3.5e-07 58.2 65 40.0
Ca_06535_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.6e-07 57.8 58 46.6
Ca_18125_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.0e-07 57.4 51 52.9
Medtr4g049480 Medicago truncatula HOM05D002644 ORTHO05D003267 1.0e-06 56.6 68 36.8
Ca_22996_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.3e-06 56.2 75 36.0
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 2.3e-06 55.5 69 42.0
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 2.3e-06 55.5 69 42.0
Ca_05034_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.0e-06 55.1 62 45.2
Ca_23086_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-06 54.7 56 50.0
RcHm_v2.0_Chr1g0316591 Rosa chinensis HOM05D000539 ORTHO05D000592 3.9e-06 54.7 72 44.4
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 3.9e-06 54.7 69 42.0
Lalb_Chr11g0070901 Lupinus albus HOM05D002644 ORTHO05D003267 5.1e-06 54.3 62 40.3


User provided reference genes

Program Settings