Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g066790 Medicago truncatula HOM05D000410 ORTHO05D003193 1.5e-110 402.9 207 100.0
Medtr4g073070 Medicago truncatula HOM05D000410 ORTHO05D003193 1.2e-40 170.6 202 50.0
TPR.G31324 Trifolium pratense HOM05D000410 ORTHO05D003193 5.4e-36 155.2 192 52.6
TPR.G877 Trifolium pratense HOM05D000410 ORTHO05D003193 3.9e-26 122.5 197 44.7
TPR.G15123 Trifolium pratense HOM05D000410 ORTHO05D003193 8.6e-26 121.3 158 50.6
Ca_19073_v3 Cicer arietinum L. HOM05D000410 ORTHO05D003193 8.1e-16 88.2 212 31.6
Medtr4g094000 Medicago truncatula HOM05D000410 ORTHO05D003193 1.7e-13 80.5 86 52.3
Haze_02137 Corylus avellana HOM05D000410 ORTHO05D003193 1.0e-10 71.2 139 36.7
Phvul.011G036000 Phaseolus vulgaris HOM05D000410 ORTHO05D003193 1.3e-10 70.9 209 29.7
Oeu055668.1 Olea europaea HOM05D000410 ORTHO05D003193 1.7e-10 70.5 126 39.7
Oeu055669.1 Olea europaea HOM05D000410 ORTHO05D003193 1.7e-10 70.5 126 39.7
Psat7g182320 Pisum sativum HOM05D000410 ORTHO05D003193 3.9e-10 69.3 206 35.9
TPR.G4626 Trifolium pratense HOM05D000410 ORTHO05D003193 3.9e-10 69.3 99 47.5
Peaxi162Scf00362g00634 Petunia axillaris HOM05D000410 ORTHO05D003193 1.1e-09 67.8 127 37.0
Lalb_Chr01g0001911 Lupinus albus HOM05D000410 ORTHO05D003193 2.5e-09 66.6 224 30.4
QL11p050700 Quercus lobata HOM05D000410 ORTHO05D003193 2.5e-09 66.6 147 35.4
Phvul.009G119200 Phaseolus vulgaris HOM05D000410 ORTHO05D003193 3.3e-09 66.2 132 32.6
Cpa.g.sc37.131 Carica papaya HOM05D000410 ORTHO05D003193 4.3e-09 65.9 128 38.3
GSVIVG01024021001 Vitis vinifera HOM05D000410 ORTHO05D003193 4.3e-09 65.9 120 35.8
Cfa005246 Carpinus fangiana HOM05D000410 ORTHO05D003193 5.6e-09 65.5 145 33.8
CiPaw.06G121800 Carya illinoinensis HOM05D000410 ORTHO05D003193 7.3e-09 65.1 143 31.5
Duzib248G1595 Durio zibethinus HOM05D000410 ORTHO05D003193 7.3e-09 65.1 121 32.2
COL.COLO4_17340 Corchorus olitorius HOM05D000410 ORTHO05D003193 9.6e-09 64.7 128 32.8
MELO3C013352.2 Cucumis melo HOM05D000410 ORTHO05D003193 2.1e-08 63.5 145 31.7
AUR62043668 Chenopodium quinoa HOM05D000410 ORTHO05D003193 2.8e-08 63.2 107 33.6
Lj1g0017404 Lotus japonicus HOM05D000410 ORTHO05D003193 2.8e-08 63.2 118 33.1
Duzib052G0401 Durio zibethinus HOM05D000410 ORTHO05D003193 3.6e-08 62.8 124 31.5
MD05G1122000 Malus domestica HOM05D000410 ORTHO05D003193 3.6e-08 62.8 132 33.3
Sc14g0002270 Simmondsia chinensis HOM05D000410 ORTHO05D003193 3.6e-08 62.8 121 37.2
AUR62013030 Chenopodium quinoa HOM05D000410 ORTHO05D003193 4.7e-08 62.4 107 33.6
CsaV3_7G001040 Cucumis sativus L. HOM05D000410 ORTHO05D003193 4.7e-08 62.4 135 33.3
Glyma.04G003600 Glycine max HOM05D000410 ORTHO05D003193 4.7e-08 62.4 126 31.7
Potri.009G135400 Populus trichocarpa HOM05D000410 ORTHO05D003193 4.7e-08 62.4 190 29.5
BcaNung02370 Brassica carinata HOM05D000410 ORTHO05D003193 8.1e-08 61.6 137 30.7
BolC7t46517H Brassica oleracea HOM05D000410 ORTHO05D003193 8.1e-08 61.6 137 30.7
arahy.Tifrunner.gnm1.ann1.E4AETI Arachis hypogaea HOM05D000410 ORTHO05D003193 1.1e-07 61.2 205 28.8
C07p60910 Brassica napus HOM05D000410 ORTHO05D003193 1.1e-07 61.2 137 30.7
Gohir.D01G159700 Gossypium hirsutum HOM05D000410 ORTHO05D003193 1.1e-07 61.2 187 29.4
Gorai.002G198200 Gossypium raimondii HOM05D000410 ORTHO05D003193 1.1e-07 61.2 187 29.4
Medtr4g036485 Medicago truncatula HOM05D000410 ORTHO05D003193 1.1e-07 61.2 136 31.6
Nitab4.5_0000079g0280 Nicotiana tabacum HOM05D000410 ORTHO05D003193 1.1e-07 61.2 207 30.9
Sopen10g025300 Solanum pennellii HOM05D000410 ORTHO05D003193 1.4e-07 60.8 131 32.8
A03p63260 Brassica napus HOM05D000410 ORTHO05D003193 1.8e-07 60.5 135 30.4
Nitab4.5_0000283g0380 Nicotiana tabacum HOM05D000410 ORTHO05D003193 1.8e-07 60.5 208 32.2
Nitab4.5_0003914g0080 Nicotiana tabacum HOM05D000410 ORTHO05D003193 1.8e-07 60.5 213 32.4
Sabra09G0105100 Salix brachista HOM05D000410 ORTHO05D003193 1.8e-07 60.5 136 31.6
Gohir.A01G168800 Gossypium hirsutum HOM05D000410 ORTHO05D003193 2.4e-07 60.1 187 29.4
C01p03790 Brassica napus HOM05D000410 ORTHO05D003193 3.1e-07 59.7 117 33.3
BolC1t00371H Brassica oleracea HOM05D000410 ORTHO05D003193 3.1e-07 59.7 117 33.3
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 3.1e-07 59.7 173 31.2
Duzib132G0350 Durio zibethinus HOM05D000410 ORTHO05D003193 3.1e-07 59.7 124 29.8
PSO541G1763 Papaver somniferum HOM05D000410 ORTHO05D003193 3.1e-07 59.7 152 28.9
PSO675G4644 Papaver somniferum HOM05D000410 ORTHO05D003193 3.1e-07 59.7 152 28.9
Sabra04G0117300 Salix brachista HOM05D000410 ORTHO05D003193 3.1e-07 59.7 187 30.5
Thecc.02G059900 Theobroma cacao HOM05D000410 ORTHO05D003193 3.1e-07 59.7 133 32.3
Lj5P178T68 Lonicera japonica HOM05D000410 ORTHO05D003193 4.0e-07 59.3 122 35.2
Nitab4.5_0000369g0100 Nicotiana tabacum HOM05D000410 ORTHO05D003193 4.0e-07 59.3 139 34.5
Glyma.06G003500 Glycine max HOM05D000410 ORTHO05D003193 5.3e-07 58.9 175 30.9
Actinidia23579 Actinidia chinensis HOM05D000410 ORTHO05D003193 6.9e-07 58.5 160 29.4
Aqoxy6G02157 Aquilegia oxysepala HOM05D000410 ORTHO05D003193 6.9e-07 58.5 175 30.3
Lalb_Chr19g0139061 Lupinus albus HOM05D000410 ORTHO05D003193 6.9e-07 58.5 218 31.2
Manes.04G076100 Manihot esculenta HOM05D000410 ORTHO05D003193 6.9e-07 58.5 118 35.6
Solyc10g055560.2 Solanum lycopersicum HOM05D000410 ORTHO05D003193 6.9e-07 58.5 131 31.3
BraA03t15404Z Brassica rapa HOM05D000410 ORTHO05D003193 1.2e-06 57.8 135 29.6
Cc09_g09780 Coffea canephora HOM05D000410 ORTHO05D003193 1.2e-06 57.8 129 33.3
TWI75G0032 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 1.2e-06 57.8 193 28.0
Nitab4.5_0002763g0020 Nicotiana tabacum HOM05D000410 ORTHO05D003193 2.0e-06 57.0 119 32.8
arahy.Tifrunner.gnm1.ann1.2PCK9I Arachis hypogaea HOM05D000410 ORTHO05D003193 2.6e-06 56.6 206 28.6
FAN27G1294 Fragaria x ananassa HOM05D000410 ORTHO05D003193 2.6e-06 56.6 164 31.7
VMungo1309G3017 Vigna mungo HOM05D000410 ORTHO05D003193 2.6e-06 56.6 196 26.0
DCAR_003171 Daucus carota HOM05D000410 ORTHO05D003193 3.4e-06 56.2 211 25.6
Potri.004G175500 Populus trichocarpa HOM05D000410 ORTHO05D003193 3.4e-06 56.2 186 28.5
TAR628G0975 Trochodendron aralioides HOM05D000410 ORTHO05D003193 3.4e-06 56.2 117 34.2
EL10Ac9g21378 Beta vulgaris HOM05D000410 ORTHO05D003193 4.4e-06 55.8 105 32.4
ClCG02G004080 Citrullus lanatus HOM05D000410 ORTHO05D003193 4.4e-06 55.8 205 29.8
Gorai.005G254300 Gossypium raimondii HOM05D000410 ORTHO05D003193 4.4e-06 55.8 118 33.9
MD10G1124700 Malus domestica HOM05D000410 ORTHO05D003193 4.4e-06 55.8 128 31.2
Peaxi162Scf00042g02412 Petunia axillaris HOM05D000410 ORTHO05D003193 4.4e-06 55.8 127 32.3
Sc14g0002260 Simmondsia chinensis HOM05D000410 ORTHO05D003193 5.8e-06 55.5 121 33.9
Gohir.A03G205100 Gossypium hirsutum HOM05D000410 ORTHO05D003193 7.6e-06 55.1 118 33.9
Gohir.D02G226400 Gossypium hirsutum HOM05D000410 ORTHO05D003193 7.6e-06 55.1 118 33.9
BcaNung00632 Brassica carinata HOM05D000410 ORTHO05D003193 9.9e-06 54.7 117 32.5
Lalb_Chr03g0025181 Lupinus albus HOM05D000410 ORTHO05D003193 9.9e-06 54.7 223 29.6
Sed0012285 Sechium edule HOM05D000410 ORTHO05D003193 9.9e-06 54.7 124 35.5


User provided reference genes

Program Settings