Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g065820 Medicago truncatula HOM05D000226 ORTHO05D000142 1.9e-46 188.7 91 100.0
Medtr2g083330 Medicago truncatula HOM05D000226 ORTHO05D000142 2.8e-29 131.7 90 73.3
Medtr2g083350 Medicago truncatula HOM05D000226 ORTHO05D000142 1.2e-27 126.3 90 67.8
Psat5g251480 Pisum sativum HOM05D000226 ORTHO05D000142 1.0e-23 113.2 91 59.3
TPR.G19996 Trifolium pratense HOM05D000226 ORTHO05D000142 1.5e-22 109.4 91 63.7
Lj3g0003046 Lotus japonicus HOM05D000226 ORTHO05D000142 2.7e-16 88.6 90 52.2
Glyma.12G212802 Glycine max HOM05D000226 ORTHO05D000142 4.6e-16 87.8 90 50.0
Phvul.005G093100 Phaseolus vulgaris HOM05D000226 ORTHO05D000142 1.4e-15 86.3 90 48.9
Lalb_Chr03g0040651 Lupinus albus HOM05D000226 ORTHO05D000142 2.2e-13 79.0 89 46.1
VMungo1080G1579 Vigna mungo HOM05D000226 ORTHO05D000142 4.8e-13 77.8 89 50.6
CiPaw.12G127600 Carya illinoinensis HOM05D000226 ORTHO05D000142 8.2e-13 77.0 87 44.8
Cfa020398 Carpinus fangiana HOM05D000226 ORTHO05D000142 1.2e-11 73.2 91 40.7
Haze_09636 Corylus avellana HOM05D000226 ORTHO05D000142 1.5e-11 72.8 90 41.1
Prupe.4G205900 Prunus persica HOM05D000226 ORTHO05D000142 3.8e-10 68.2 90 40.0
Ciclev10010638m.g Citrus clementina HOM05D000226 ORTHO05D000142 6.5e-10 67.4 90 44.4
MD11G1223900 Malus domestica HOM05D000226 ORTHO05D000142 1.4e-09 66.2 91 38.5
Gorai.002G084500 Gossypium raimondii HOM05D000226 ORTHO05D000142 3.2e-09 65.1 90 36.7
QL08p012567 Quercus lobata HOM05D000226 ORTHO05D000142 3.2e-09 65.1 90 40.0
RcHm_v2.0_Chr5g0037891 Rosa chinensis HOM05D000226 ORTHO05D000142 4.2e-09 64.7 90 40.0
Gohir.A01G076401 Gossypium hirsutum HOM05D000226 ORTHO05D000142 5.5e-09 64.3 90 36.7
arahy.Tifrunner.gnm1.ann1.2TF7P0 Arachis hypogaea HOM05D000226 ORTHO05D000142 7.2e-09 63.9 88 42.0
arahy.Tifrunner.gnm1.ann1.K96LG6 Arachis hypogaea HOM05D000226 ORTHO05D000142 9.4e-09 63.5 88 42.0
COL.COLO4_09607 Corchorus olitorius HOM05D000226 ORTHO05D000142 1.2e-08 63.2 90 38.9
Gohir.1Z049321 Gossypium hirsutum HOM05D000226 ORTHO05D000142 2.1e-08 62.4 90 36.7
Duzib213G0350 Durio zibethinus HOM05D000226 ORTHO05D000142 3.6e-08 61.6 90 36.7
FvH4_3g22020 Fragaria vesca HOM05D000226 ORTHO05D000142 3.6e-08 61.6 85 36.5
FAN25G0873 Fragaria x ananassa HOM05D000226 ORTHO05D000142 1.8e-07 59.3 85 34.1
Gohir.1Z049618 Gossypium hirsutum HOM05D000226 ORTHO05D000142 6.7e-07 57.4 71 38.0
FAN21G0112 Fragaria x ananassa HOM05D000226 ORTHO05D000142 3.3e-06 55.1 88 33.0
Medtr2g083320 Medicago truncatula HOM05D000226 ORTHO05D000142 3.3e-06 55.1 90 40.0
Atru.chr2.3246 Acer truncatum HOM05D000226 ORTHO05D000142 5.7e-06 54.3 92 40.2
Sabra16G0285100 Salix brachista HOM05D000226 ORTHO05D036483 9.7e-06 53.5 86 32.6


User provided reference genes

Program Settings