Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 1.7e-61 239.2 124 100.0
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 1.7e-61 239.2 124 100.0
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 1.3e-40 169.9 129 76.0
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 1.0e-37 160.2 126 70.6
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 3.1e-31 138.7 131 65.6
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 1.0e-29 133.7 124 58.9
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 2.5e-28 129.0 119 63.0
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 9.4e-28 127.1 120 59.2
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 2.1e-27 125.9 128 59.4
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 3.2e-12 75.5 93 50.5
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 1.2e-11 73.6 123 41.5
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 3.6e-11 72.0 133 40.6
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 3.6e-11 72.0 85 45.9
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 3.6e-11 72.0 118 39.0
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 4.0e-10 68.6 85 47.1
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 8.8e-10 67.4 121 43.0
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 1.2e-09 67.0 97 43.3
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 2.0e-09 66.2 98 42.9
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 2.6e-09 65.9 120 35.0
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 4.4e-09 65.1 79 44.3
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 7.5e-09 64.3 120 35.8
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 9.8e-09 63.9 91 45.1
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 1.3e-08 63.5 86 44.2
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 1.3e-08 63.5 84 40.5
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 3.7e-08 62.0 87 42.5
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 3.7e-08 62.0 106 38.7
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 4.9e-08 61.6 127 41.7
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 6.3e-08 61.2 116 39.7
Sed0026701 Sechium edule HOM05D008423 ORTHO05D010599 6.3e-08 61.2 87 44.8
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 8.3e-08 60.8 85 42.4
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 2.4e-07 59.3 73 43.8
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 2.4e-07 59.3 73 45.2
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 2.4e-07 59.3 73 43.8
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 2.4e-07 59.3 100 37.0
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 3.1e-07 58.9 73 45.2
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 3.1e-07 58.9 71 49.3
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 5.4e-07 58.2 70 47.1
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 5.4e-07 58.2 98 42.9
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 5.4e-07 58.2 78 41.0
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 7.0e-07 57.8 110 39.1
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 2.0e-06 56.2 116 37.9
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 4.5e-06 55.1 70 47.1


User provided reference genes

Program Settings