Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.4e-61 239.6 131 100.0
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 5.4e-58 227.6 131 94.7
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 4.6e-57 224.6 131 93.1
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.1e-55 219.9 132 93.2
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 8.4e-51 203.8 131 85.5
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.9e-50 202.6 131 84.7
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.4e-50 202.2 131 84.7
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 4.6e-49 198.0 131 82.4
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.9e-48 194.9 131 80.9
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 4.3e-47 191.4 132 82.6
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 5.6e-47 191.0 132 81.1
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 5.6e-47 191.0 127 81.1
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 6.2e-46 187.6 129 79.1
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.1e-45 186.8 131 77.9
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.1e-45 186.8 129 79.1
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.8e-45 186.0 128 78.1
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.4e-45 185.7 123 81.3
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 4.0e-45 184.9 116 87.1
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 5.2e-45 184.5 121 81.8
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.2e-45 184.5 123 81.3
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 5.2e-45 184.5 130 78.5
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 6.8e-45 184.1 131 77.1
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.2e-44 183.3 121 83.5
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 5.8e-44 181.0 131 77.1
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 5.8e-44 181.0 121 79.3
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.3e-43 179.9 129 78.3
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.3e-43 179.9 116 83.6
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.3e-43 179.9 129 76.7
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.7e-43 179.5 131 74.8
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 1.7e-43 179.5 123 78.9
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.2e-43 179.1 122 79.5
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 8.4e-43 177.2 132 76.5
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 8.4e-43 177.2 131 75.6
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.1e-42 176.8 129 76.0
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.4e-42 176.4 109 88.1
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.9e-42 176.0 120 80.0
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 3.2e-42 175.3 117 81.2
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 5.4e-42 174.5 116 85.3
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 9.3e-42 173.7 136 72.8
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.0e-41 171.0 115 82.6
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 6.0e-41 171.0 113 81.4
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 6.0e-41 171.0 126 74.6
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 7.8e-41 170.6 121 80.2
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 7.8e-41 170.6 121 80.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.0e-40 170.2 123 79.7
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 3.0e-40 168.7 129 72.1
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 3.9e-40 168.3 124 75.8
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 3.9e-40 168.3 131 75.6
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 3.9e-40 168.3 130 73.1
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 3.9e-40 168.3 120 75.8
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 5.1e-40 167.9 127 74.0
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 5.1e-40 167.9 127 74.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 5.1e-40 167.9 129 73.6
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 5.1e-40 167.9 129 72.1
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 6.6e-40 167.5 127 74.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 6.6e-40 167.5 127 74.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 6.6e-40 167.5 127 74.0
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.1e-39 166.8 117 77.8
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.1e-39 166.8 124 76.6
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.5e-39 166.4 118 75.4
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.3e-39 165.2 121 77.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.6e-39 164.5 110 80.9
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 7.3e-39 164.1 137 67.9
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 7.3e-39 164.1 137 67.9
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.3e-38 163.3 158 62.7
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-38 163.3 153 64.1
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 1.6e-38 162.9 124 71.8
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 2.1e-38 162.5 118 75.4
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.8e-38 162.2 128 69.5
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.8e-38 162.2 128 69.5
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.8e-38 162.2 110 80.0
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 3.6e-38 161.8 125 72.8
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 1.1e-37 160.2 121 74.4
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.8e-37 159.5 124 73.4
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 3.1e-37 158.7 122 73.8
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 9.0e-37 157.1 108 80.6
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 9.0e-37 157.1 167 58.1
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 2.6e-36 155.6 113 75.2
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.4e-36 155.2 108 78.7
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.4e-36 154.8 108 79.6
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 5.8e-36 154.5 124 71.0
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 4.9e-35 151.4 124 63.7
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 6.4e-35 151.0 113 74.3
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 8.4e-35 150.6 129 65.1
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 2.4e-34 149.1 114 71.9
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.4e-34 147.9 125 66.4
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 7.1e-34 147.5 109 72.5
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 1.2e-33 146.7 116 70.7
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.5e-31 139.8 132 65.9
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 7.4e-31 137.5 127 61.4
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.4e-29 133.3 136 58.8
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 3.1e-29 132.1 103 68.9
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 2.0e-28 129.4 122 63.1
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.6e-28 129.0 115 70.4
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 6.4e-27 124.4 109 63.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.4e-27 124.0 110 65.5
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 8.4e-27 124.0 88 76.1
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.1e-26 120.9 114 62.3
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.7e-25 119.0 110 64.5
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.4e-21 105.9 112 57.1
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 3.8e-19 98.6 74 70.3
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 4.6e-17 91.7 115 44.3
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.0e-16 90.5 94 61.7
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.3e-16 90.1 73 64.4
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 1.3e-14 83.6 117 43.6
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-13 79.7 102 40.2
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 6.9e-13 77.8 51 82.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 3.3e-07 58.9 52 63.5
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 5.7e-07 58.2 55 56.4


User provided reference genes

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