Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.0e-222 775.4 379 100.0
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 2.3e-157 559.3 324 83.6
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.1e-156 557.0 324 83.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 6.8e-154 547.7 323 83.0
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 7.6e-145 517.7 325 77.2
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.2e-143 512.3 324 75.3
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 7.1e-143 511.1 324 77.2
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 6.0e-142 508.1 323 75.5
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.1e-138 495.7 338 71.6
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 2.9e-128 462.6 327 66.7
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 8.4e-128 461.1 353 63.2
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 7.1e-127 458.0 322 67.7
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 4.6e-126 455.3 324 65.4
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.0e-125 454.1 322 67.7
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 5.1e-125 451.8 322 67.7
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.7e-125 451.4 324 64.8
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 4.3e-124 448.7 327 63.9
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 4.8e-123 445.3 342 62.0
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.8e-122 443.4 328 64.9
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 4.0e-122 442.2 327 65.1
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 4.0e-122 442.2 327 65.1
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 6.9e-122 441.4 327 64.5
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 2.0e-121 439.9 323 65.3
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 9.9e-121 437.6 327 64.8
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 3.2e-119 432.6 320 64.1
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 5.5e-119 431.8 321 66.0
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.2e-118 430.6 318 64.2
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 2.1e-118 429.9 327 60.6
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 2.7e-118 429.5 326 62.9
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.8e-117 426.8 317 63.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 3.9e-117 425.6 318 63.2
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 6.7e-117 424.9 322 62.4
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 7.4e-116 421.4 335 59.1
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.3e-115 420.6 325 62.8
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.8e-114 416.8 325 62.2
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.8e-114 416.8 326 63.8
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 5.3e-114 415.2 325 62.2
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.2e-113 414.1 324 61.4
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.0e-113 413.3 342 59.4
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 4.5e-113 412.1 326 60.4
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.3e-112 410.6 327 59.0
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 3.8e-112 409.1 326 59.8
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 8.4e-112 407.9 326 59.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 5.5e-111 405.2 337 57.3
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 7.1e-111 404.8 326 60.1
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 7.1e-111 404.8 326 60.7
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 2.1e-110 403.3 326 58.6
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.7e-110 402.9 326 59.2
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 3.5e-110 402.5 323 60.7
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.6e-110 402.1 333 58.9
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.6e-110 402.1 323 59.4
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.6e-110 402.1 274 67.5
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 6.0e-110 401.7 326 58.3
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.8e-109 400.2 327 57.8
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.3e-109 399.8 323 58.8
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 8.7e-109 397.9 326 58.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.9e-108 396.7 331 57.4
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.9e-108 396.7 325 58.8
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 4.3e-108 395.6 326 57.1
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.3e-107 394.0 326 58.6
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 8.2e-107 391.3 322 55.0
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 8.2e-107 391.3 290 67.9
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 4.1e-106 389.0 314 59.9
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 1.3e-104 384.0 328 58.2
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.3e-104 384.0 323 57.9
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.7e-104 383.6 321 56.1
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.9e-104 382.9 322 56.5
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 2.9e-104 382.9 325 54.8
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 5.0e-104 382.1 326 54.3
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.1e-103 380.9 314 59.2
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.2e-103 379.0 322 54.0
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.2e-103 379.0 322 54.0
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 9.3e-103 377.9 337 56.7
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.1e-102 376.7 322 55.3
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.1e-102 376.7 321 55.5
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.1e-102 376.7 325 53.8
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.1e-102 376.7 320 59.1
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 6.1e-102 375.2 328 55.2
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 4.3e-100 369.0 357 50.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 3.7e-99 365.9 346 50.3
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.4e-98 364.0 320 57.5
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.4e-98 364.0 331 54.4
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 6.9e-98 361.7 296 60.1
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 2.9e-96 356.3 317 56.8
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 4.2e-95 352.4 333 53.5
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 5.5e-95 352.1 322 55.3
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 4.5e-89 332.4 252 64.7
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.0e-88 331.3 265 60.8
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.8e-88 329.3 255 63.5
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.1e-87 327.8 252 63.9
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 5.5e-87 325.5 317 52.1
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.7e-86 323.2 325 51.4
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 5.2e-85 318.9 296 56.8
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.1e-82 311.2 321 50.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.2e-81 307.8 217 65.9
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.2e-80 303.5 283 56.2
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 4.2e-79 299.3 325 50.5
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 7.2e-79 298.5 260 55.4
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 5.7e-76 288.9 327 47.4
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.8e-74 283.9 236 55.5
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.4e-74 283.5 195 74.4
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 2.2e-72 276.9 262 54.2
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 7.2e-71 271.9 190 67.4
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 1.2e-68 264.6 223 64.6
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.4e-61 241.1 181 59.1
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 7.5e-60 235.3 335 38.8
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.1e-55 221.5 291 45.0
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 7.5e-44 182.2 129 59.7
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 5.6e-39 166.0 126 60.3
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 2.4e-34 150.6 300 35.3
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 4.1e-34 149.8 103 69.9
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 4.7e-30 136.3 180 42.2
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 3.5e-25 120.2 146 43.2
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 2.0e-20 104.4 69 75.4
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.7e-17 94.0 72 56.9
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 3.3e-15 87.0 200 30.0


User provided reference genes

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