Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g060610 Medicago truncatula HOM05D004423 ORTHO05D005464 1.5e-59 232.6 118 100.0
Medtr5g046240 Medicago truncatula HOM05D004423 ORTHO05D005464 7.6e-19 97.4 73 72.6
TPR.G38573 Trifolium pratense HOM05D004423 ORTHO05D005464 7.6e-19 97.4 73 72.6
Psat2g133680 Pisum sativum HOM05D004423 ORTHO05D005464 8.4e-18 94.0 111 52.3
Ca_05030_v3 Cicer arietinum L. HOM05D004423 ORTHO05D005464 4.2e-17 91.7 73 68.5
Lj2g0017242 Lotus japonicus HOM05D004423 ORTHO05D005464 1.3e-15 86.7 73 65.8
Glyma.01G063600 Glycine max HOM05D004423 ORTHO05D005464 9.6e-14 80.5 73 58.9
arahy.Tifrunner.gnm1.ann1.YN7PRK Arachis hypogaea HOM05D004423 ORTHO05D005464 4.8e-13 78.2 73 54.8
Glyma.02G121200 Glycine max HOM05D004423 ORTHO05D005464 1.1e-12 77.0 73 56.2
Phvul.003G039700 Phaseolus vulgaris HOM05D004423 ORTHO05D005464 4.0e-12 75.1 72 58.3
arahy.Tifrunner.gnm1.ann1.CJIC4D Arachis hypogaea HOM05D004423 ORTHO05D005464 9.0e-12 73.9 73 54.8
VMungo1215G3113 Vigna mungo HOM05D004423 ORTHO05D005464 9.0e-12 73.9 72 56.9
Lalb_Chr17g0341361 Lupinus albus HOM05D004423 ORTHO05D005464 1.5e-11 73.2 73 57.5
Cfa005315 Carpinus fangiana HOM05D004423 ORTHO05D005464 5.5e-09 64.7 74 50.0
Potri.009G139900 Populus trichocarpa HOM05D004423 ORTHO05D005464 1.2e-08 63.5 74 45.9
Haze_02070 Corylus avellana HOM05D004423 ORTHO05D005464 1.6e-08 63.2 74 48.6
Sabra09G0108500 Salix brachista HOM05D004423 ORTHO05D005464 1.6e-08 63.2 74 47.3
Ciclev10027678m.g Citrus clementina HOM05D004423 ORTHO05D005464 2.1e-08 62.8 73 47.9
Thecc.02G052800 Theobroma cacao HOM05D004423 ORTHO05D005464 2.1e-08 62.8 74 48.6
Duzib132G0529 Durio zibethinus HOM05D004423 ORTHO05D005464 2.7e-08 62.4 74 50.0
Dinv41903 Davidia involucrata HOM05D004423 ORTHO05D005464 3.5e-08 62.0 74 50.0
RcHm_v2.0_Chr6g0279371 Rosa chinensis HOM05D004423 ORTHO05D005464 7.9e-08 60.8 74 47.3
Gohir.A01G171600 Gossypium hirsutum HOM05D004423 ORTHO05D005464 1.8e-07 59.7 72 47.2
Gorai.002G201600 Gossypium raimondii HOM05D004423 ORTHO05D005464 2.3e-07 59.3 72 47.2
ECA246G1499 Erigeron canadensis HOM05D004423 ORTHO05D005464 3.0e-07 58.9 112 36.6
Rhsim11G0195000 Rhododendron simsii HOM05D004423 ORTHO05D005464 3.0e-07 58.9 79 40.5
FvH4_2g15920 Fragaria vesca HOM05D004423 ORTHO05D005464 3.9e-07 58.5 74 45.9
FAN15G2581 Fragaria x ananassa HOM05D004423 ORTHO05D005464 3.9e-07 58.5 74 45.9
FAN24G1532 Fragaria x ananassa HOM05D004423 ORTHO05D005464 3.9e-07 58.5 74 45.9
Actinidia20541 Actinidia chinensis HOM05D004423 ORTHO05D005464 5.1e-07 58.2 112 37.5
Gohir.D01G162500 Gossypium hirsutum HOM05D004423 ORTHO05D005464 5.1e-07 58.2 72 45.8
AUR62009995 Chenopodium quinoa HOM05D004423 ORTHO05D005464 6.7e-07 57.8 74 43.2
AUR62012983 Chenopodium quinoa HOM05D004423 ORTHO05D005464 6.7e-07 57.8 74 43.2
MD10G1131500 Malus domestica HOM05D004423 ORTHO05D005464 6.7e-07 57.8 74 45.9
Sc18g0006140 Simmondsia chinensis HOM05D004423 ORTHO05D005464 8.7e-07 57.4 74 41.9
CANSAT25G0289 Cannabis sativa HOM05D004423 ORTHO05D005464 1.1e-06 57.0 73 46.6
CiPaw.05G087000 Carya illinoinensis HOM05D004423 ORTHO05D005464 1.1e-06 57.0 74 45.9
Prupe.8G172300 Prunus persica HOM05D004423 ORTHO05D005464 1.5e-06 56.6 74 47.3
TAR376G0159 Trochodendron aralioides HOM05D004423 ORTHO05D005464 1.5e-06 56.6 70 47.1
vmacro02301 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 1.5e-06 56.6 73 45.2
Actinidia18027 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.9e-06 56.2 112 35.7
Peaxi162Scf00362g00356 Petunia axillaris HOM05D004423 ORTHO05D005464 2.5e-06 55.8 74 43.2
QL11p053191 Quercus lobata HOM05D004423 ORTHO05D005464 3.3e-06 55.5 73 45.2
COL.COLO4_18006 Corchorus olitorius HOM05D004423 ORTHO05D005464 4.3e-06 55.1 74 47.3
FAN20G1295 Fragaria x ananassa HOM05D004423 ORTHO05D005464 4.3e-06 55.1 74 41.9
MD05G1128200 Malus domestica HOM05D004423 ORTHO05D005464 4.3e-06 55.1 74 44.6
Lj5C174T8 Lonicera japonica HOM05D004423 ORTHO05D005464 5.6e-06 54.7 116 37.9
Ah.01g008070 Amaranthus hybridus HOM05D004423 ORTHO05D005464 9.6e-06 53.9 73 42.5
Sed0008640 Sechium edule HOM05D004423 ORTHO05D005464 9.6e-06 53.9 113 35.4
Solyc01g111910.3 Solanum lycopersicum HOM05D004423 ORTHO05D005464 9.6e-06 53.9 74 43.2
Sopen01g053960 Solanum pennellii HOM05D004423 ORTHO05D005464 9.6e-06 53.9 74 43.2


User provided reference genes

Program Settings