Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.6e-236 821.6 396 100.0
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 4.4e-212 741.1 396 90.4
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 3.1e-210 734.9 394 89.6
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 3.9e-192 674.9 407 82.1
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 2.2e-187 659.1 400 81.2
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 3.0e-184 648.7 402 79.6
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 3.9e-184 648.3 404 79.5
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.3e-183 645.2 403 79.2
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 4.4e-172 608.2 398 74.6
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 4.2e-130 468.8 400 59.5
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 3.7e-126 455.7 402 57.7
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 9.1e-125 451.1 404 55.4
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 4.5e-124 448.7 395 56.5
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 5.9e-124 448.4 397 55.2
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 5.0e-123 445.3 394 55.6
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 6.5e-123 444.9 406 54.7
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 7.2e-122 441.4 398 55.0
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.8e-120 436.8 396 55.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 3.0e-120 436.0 399 56.1
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.0e-119 433.3 396 55.8
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 2.0e-119 433.3 396 55.6
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.6e-119 433.0 403 54.6
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.3e-118 430.6 399 56.1
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 4.8e-118 428.7 402 55.2
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 6.3e-118 428.3 406 54.7
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 2.4e-117 426.4 412 52.9
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 4.1e-117 425.6 402 54.7
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 5.3e-117 425.2 400 55.5
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.2e-116 424.1 401 53.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 1.9e-114 416.8 398 55.0
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 1.9e-114 416.8 402 53.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 1.2e-113 414.1 407 53.3
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 2.7e-113 412.9 406 53.4
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 2.2e-110 403.3 399 53.1
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 6.3e-110 401.7 405 51.9
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 2.0e-108 396.7 386 53.4
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 3.8e-107 392.5 403 48.9
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 1.1e-106 391.0 403 48.6
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 1.5e-106 390.6 368 57.1
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 2.5e-106 389.8 396 52.3
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 8.0e-105 384.8 400 49.8
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.2e-102 376.7 398 50.5
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.2e-100 370.9 394 50.0
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 2.0e-100 370.2 403 50.9
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 4.5e-100 369.0 364 51.9
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.9e-100 368.6 323 56.0
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.9e-100 368.6 323 56.3
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 3.8e-99 365.9 394 49.7
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 5.0e-99 365.5 394 49.7
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 6.6e-99 365.2 394 49.7
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 6.6e-99 365.2 394 49.7
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 1.5e-98 364.0 394 50.0
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 1.5e-98 364.0 399 49.4
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.9e-98 363.6 395 49.1
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 8.0e-97 358.2 401 49.6
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 3.4e-95 352.8 404 47.3
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.2e-92 344.4 323 53.9
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 3.5e-92 342.8 313 57.8
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 7.8e-92 341.7 207 81.2
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 8.0e-89 331.6 324 52.8
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.4e-88 330.9 365 47.7
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 3.1e-88 329.7 366 48.4
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 3.1e-88 329.7 367 48.2
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 8.3e-86 321.6 303 51.8
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 1.9e-82 310.5 352 46.6
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.8e-80 303.9 411 43.1
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 4.4e-79 299.3 410 42.0
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 2.4e-77 293.5 403 41.4
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.6e-73 279.6 389 42.4
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 1.2e-68 264.6 385 40.0
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 2.8e-49 200.3 240 45.0
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.5e-28 130.2 139 44.6


User provided reference genes

Program Settings