Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 5.2e-179 630.9 324 100.0
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-109 400.2 255 85.9
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-87 326.6 248 72.2
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 7.5e-85 318.2 248 67.3
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.9e-84 316.2 248 66.9
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 2.9e-84 316.2 248 68.1
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.9e-83 313.5 247 66.8
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 3.6e-79 299.3 248 66.1
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.4e-78 297.4 248 66.9
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.9e-76 289.7 248 63.3
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 5.4e-75 285.4 177 84.2
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.2e-71 271.9 248 63.3
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 8.3e-68 261.5 248 60.5
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 7.1e-67 258.5 248 58.1
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 4.3e-64 249.2 248 60.1
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 6.4e-60 235.3 246 57.3
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 6.4e-60 235.3 233 60.1
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-59 232.6 248 55.6
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-59 232.6 248 55.6
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 7.1e-59 231.9 280 53.6
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 3.5e-58 229.6 293 49.1
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 4.6e-58 229.2 273 53.8
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 6.0e-58 228.8 285 48.4
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 5.1e-57 225.7 239 58.6
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 6.6e-57 225.3 248 54.0
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 1.1e-56 224.6 248 55.2
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-56 224.2 217 59.9
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-56 224.2 217 59.9
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 3.6e-55 219.5 254 54.3
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 3.6e-55 219.5 248 53.6
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 4.8e-55 219.2 207 62.8
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 2.4e-54 216.9 249 53.0
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 6.9e-54 215.3 254 54.3
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-53 214.2 240 54.6
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 9.9e-53 211.5 248 54.4
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 1.3e-52 211.1 250 54.0
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 6.4e-52 208.8 248 52.8
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 3.2e-51 206.5 248 52.8
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 7.1e-51 205.3 281 47.3
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 3.9e-49 199.5 247 52.6
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.5e-48 197.6 190 57.9
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.4e-46 190.3 184 59.8
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 3.1e-46 189.9 149 65.1
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 1.3e-44 184.5 160 63.8
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 1.1e-43 181.4 190 56.3
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 3.2e-43 179.9 248 48.0
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-42 177.2 201 51.2
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 3.9e-41 172.9 130 72.3
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 8.7e-41 171.8 190 53.2
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 3.3e-40 169.9 93 97.8
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 1.8e-38 164.1 248 43.1
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 5.3e-38 162.5 245 44.5
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 8.7e-33 145.2 199 47.2
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 1.1e-32 144.8 157 54.8
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 4.3e-32 142.9 172 51.2
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 4.1e-30 136.3 117 63.2
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-28 131.7 151 53.6
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 1.9e-27 127.5 111 64.0
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-27 127.5 206 41.3
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 2.7e-26 123.6 96 65.6
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 3.9e-25 119.8 135 55.6
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 6.7e-25 119.0 104 59.6
Medtr3g063320 Medicago truncatula HOM05D000092 ORTHO05D005910 5.3e-22 109.4 81 70.4
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 1.2e-21 108.2 134 52.2
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 8.5e-20 102.1 137 46.7
arahy.Tifrunner.gnm1.ann1.CULB88 Arachis hypogaea HOM05D008660 ORTHO05D005910 6.9e-14 82.4 173 32.9
TPR.G20665 Trifolium pratense HOM05D008660 ORTHO05D005910 9.1e-14 82.0 75 64.0
arahy.Tifrunner.gnm1.ann1.79SUWC Arachis hypogaea HOM05D000092 ORTHO05D011874 4.5e-13 79.7 173 31.8
TPR.G10936 Trifolium pratense HOM05D000092 ORTHO05D005910 2.5e-11 73.9 67 59.7
TPR.G8117 Trifolium pratense HOM05D027040 ORTHO05D036751 1.8e-09 67.8 200 23.0
Ca_31309_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.7e-07 61.2 50 64.0
TPR.G29423 Trifolium pratense HOM05D000092 ORTHO05D005910 2.8e-07 60.5 80 47.5
Medtr7g068110 Medicago truncatula HOM05D027040 ORTHO05D036751 4.1e-06 56.6 154 26.0
Phvul.003G002300 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 7.0e-06 55.8 126 30.2
Medtr1g094040 Medicago truncatula HOM05D000092 ORTHO05D005910 9.1e-06 55.5 111 33.3


User provided reference genes

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