Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 0.0e+00 1305.8 659 100.0
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 3.1e-255 885.2 656 72.9
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 3.4e-217 758.8 643 64.5
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 6.8e-210 734.6 493 77.9
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.6e-198 696.8 644 60.2
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.9e-196 689.9 665 58.8
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 2.1e-187 659.8 647 57.5
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 3.1e-186 656.0 684 55.6
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.8e-181 640.2 699 53.8
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 4.2e-175 619.0 629 58.7
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.9e-159 567.0 653 51.0
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 6.5e-144 515.4 671 47.2
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 8.5e-144 515.0 654 49.1
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.2e-143 512.7 670 47.6
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 3.4e-140 503.1 700 46.6
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 2.8e-139 500.0 667 47.4
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 4.1e-138 496.1 669 48.1
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 5.3e-138 495.7 595 51.9
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 3.5e-137 493.0 665 46.5
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 5.9e-137 492.3 654 47.6
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.0e-136 491.5 663 46.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 2.9e-136 490.0 661 46.3
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 5.0e-136 489.2 660 45.0
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 7.2e-135 485.3 667 47.1
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.6e-134 484.2 656 46.3
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 4.0e-133 479.6 566 51.1
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.0e-133 479.6 661 45.5
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 2.0e-132 477.2 664 46.5
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 3.4e-132 476.5 687 44.5
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.7e-131 473.0 650 46.8
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 4.1e-130 469.5 665 44.7
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.0e-128 464.9 661 45.8
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 2.5e-127 460.3 676 44.1
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 4.2e-127 459.5 669 42.9
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 6.8e-125 452.2 545 48.6
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 5.7e-124 449.1 673 42.3
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 7.5e-124 448.7 648 44.8
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 2.8e-123 446.8 674 41.4
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 9.2e-122 441.8 688 42.0
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.5e-119 434.5 663 41.8
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 4.3e-119 433.0 675 43.1
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.8e-117 427.6 517 48.7
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.2e-116 424.9 664 43.1
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.4e-114 417.9 669 40.1
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 2.7e-113 413.7 405 54.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 3.0e-112 410.2 677 40.9
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 3.0e-112 410.2 506 47.8
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 3.9e-112 409.8 700 40.1
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.6e-110 404.4 646 41.6
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 4.0e-109 399.8 558 46.6
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 8.9e-109 398.7 657 40.9
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 4.4e-108 396.4 539 48.4
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 7.1e-106 389.0 645 41.2
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 7.1e-106 389.0 574 43.9
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.6e-105 387.9 636 42.0
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 1.0e-104 385.2 319 63.0
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.3e-104 384.8 678 38.2
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.7e-104 384.4 649 40.1
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 2.5e-103 380.6 674 40.1
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.9e-99 367.1 647 38.3
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.4e-98 364.8 475 45.1
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 4.3e-95 353.2 634 37.9
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 4.3e-95 353.2 731 36.5
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 5.6e-95 352.8 641 38.4
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 8.1e-94 349.0 642 37.5
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 5.8e-92 342.8 263 65.4
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.1e-89 334.3 655 40.2
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 2.7e-89 334.0 675 37.2
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 4.6e-89 333.2 637 38.8
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 7.8e-89 332.4 633 39.3
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.0e-88 330.5 448 48.9
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 2.4e-85 320.9 662 34.6
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 2.4e-85 320.9 406 44.1
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 4.9e-83 313.2 645 37.4
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 6.4e-83 312.8 669 35.6
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 8.4e-83 312.4 692 35.1
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 9.6e-79 298.9 674 34.4
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.2e-78 296.2 554 39.2
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 4.0e-77 293.5 382 50.3
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 6.4e-75 286.2 738 34.6
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 8.4e-75 285.8 548 39.6
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.9e-74 284.6 362 43.6
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 3.2e-74 283.9 185 85.9
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 4.2e-74 283.5 548 39.6
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 4.2e-74 283.5 552 38.6
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 9.3e-74 282.3 309 55.0
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 4.6e-73 280.0 200 73.0
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 4.3e-71 273.5 673 32.4
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 7.4e-71 272.7 341 45.2
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 8.1e-70 269.2 679 31.2
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 5.8e-68 263.1 403 42.2
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 3.2e-66 257.3 224 62.5
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.0e-59 235.7 253 49.4
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.5e-55 221.1 350 39.7
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 4.1e-53 213.8 310 41.3
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 8.5e-51 206.1 345 42.3
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.2e-50 203.8 307 41.4
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 3.0e-48 197.6 366 34.7
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 6.3e-46 189.9 349 39.3
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 3.4e-44 184.1 237 44.7
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.3e-38 165.6 347 34.6
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 4.5e-36 157.1 226 41.6
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.1e-33 148.3 439 27.3
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.1e-33 148.3 296 34.5
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 8.0e-33 146.4 345 33.0
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 3.0e-32 144.4 374 34.2
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.4e-29 135.6 201 44.8
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.1e-25 121.7 135 46.7
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.4e-21 108.2 147 46.9
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 6.8e-16 90.1 246 32.1
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 3.8e-11 74.3 52 63.5
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 2.6e-07 61.6 122 39.3
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.3e-06 59.3 91 48.4
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.9e-06 58.2 147 35.4
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.7e-06 57.8 222 27.5


User provided reference genes

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