Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g044430 Medicago truncatula HOM05D000327 ORTHO05D000218 8.6e-43 176.4 79 100.0
Psat1g138280 Pisum sativum HOM05D000327 ORTHO05D000218 2.2e-14 82.0 56 71.4
Medtr2g044440 Medicago truncatula HOM05D000327 ORTHO05D000218 1.5e-10 69.3 53 62.3
Lj6g0000628 Lotus japonicus HOM05D000327 ORTHO05D000218 1.9e-10 68.9 51 64.7
Lj6g0018182 Lotus japonicus HOM05D000327 ORTHO05D000218 1.9e-10 68.9 52 65.4
TPR.G31077 Trifolium pratense HOM05D000327 ORTHO05D000218 1.9e-10 68.9 53 64.2
Lj6g0015838 Lotus japonicus HOM05D000327 ORTHO05D000218 2.8e-09 65.1 53 58.5
Medtr2g044250 Medicago truncatula HOM05D000327 ORTHO05D000218 2.8e-09 65.1 53 52.8
arahy.Tifrunner.gnm1.ann1.ZQY6UL Arachis hypogaea HOM05D000327 ORTHO05D000218 1.8e-08 62.4 51 56.9
arahy.Tifrunner.gnm1.ann1.DJ8HM4 Arachis hypogaea HOM05D000327 ORTHO05D000218 2.4e-08 62.0 51 56.9
Carub.0004s0636 Capsella rubella HOM05D000327 ORTHO05D000218 2.4e-08 62.0 55 45.5
arahy.Tifrunner.gnm1.ann1.S4R5FC Arachis hypogaea HOM05D000327 ORTHO05D000218 4.0e-08 61.2 52 50.0
Manes.03G045200 Manihot esculenta HOM05D000327 ORTHO05D000218 6.9e-08 60.5 54 51.9
THA.LOC104819453 Tarenaya hassleriana HOM05D000327 ORTHO05D000218 9.0e-08 60.1 54 51.9
DCAR_027146 Daucus carota HOM05D000327 ORTHO05D000218 1.2e-07 59.7 54 46.3
AL5G34660 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 1.5e-07 59.3 51 49.0
AT3G53690 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 1.5e-07 59.3 51 49.0
Ca_02283_v3 Cicer arietinum L. HOM05D000327 ORTHO05D000218 2.0e-07 58.9 37 73.0
VMungo1309G3132 Vigna mungo HOM05D000327 ORTHO05D000218 2.0e-07 58.9 50 54.0
TPR.G36737 Trifolium pratense HOM05D000327 ORTHO05D000218 3.4e-07 58.2 53 47.2
FvH4_1g09490 Fragaria vesca HOM05D000327 ORTHO05D000218 4.5e-07 57.8 55 47.3
Thhalv10000966m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 5.8e-07 57.4 51 49.0
CARHR184780 Cardamine hirsuta HOM05D000327 ORTHO05D000218 9.9e-07 56.6 55 41.8
TWI63G1013 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 9.9e-07 56.6 51 51.0
Carub.0004s0638 Capsella rubella HOM05D000327 ORTHO05D000218 1.3e-06 56.2 55 41.8
Medtr2g044290 Medicago truncatula HOM05D000327 ORTHO05D000218 1.3e-06 56.2 52 48.1
Phvul.009G223300 Phaseolus vulgaris HOM05D000327 ORTHO05D000218 1.3e-06 56.2 50 52.0
arahy.Tifrunner.gnm1.ann1.93SQK7 Arachis hypogaea HOM05D000327 ORTHO05D000218 1.7e-06 55.8 51 51.0
arahy.Tifrunner.gnm1.ann1.C5S9N3 Arachis hypogaea HOM05D000327 ORTHO05D000218 1.7e-06 55.8 51 51.0
arahy.Tifrunner.gnm1.ann1.K5Q7B4 Arachis hypogaea HOM05D000327 ORTHO05D000218 1.7e-06 55.8 51 51.0
FAN19G0157 Fragaria x ananassa HOM05D002094 ORTHO05D002113 1.7e-06 55.8 55 45.5
FAN23G1569 Fragaria x ananassa HOM05D000327 ORTHO05D000218 1.7e-06 55.8 55 45.5
FAN26G0328 Fragaria x ananassa HOM05D000259 ORTHO05D000155 1.7e-06 55.8 55 45.5
FAN26G1366 Fragaria x ananassa HOM05D000259 ORTHO05D000155 1.7e-06 55.8 55 45.5
arahy.Tifrunner.gnm1.ann1.6STX6Z Arachis hypogaea HOM05D000327 ORTHO05D000218 2.2e-06 55.5 52 48.1
CANSAT56G0750 Cannabis sativa HOM05D000327 ORTHO05D000218 2.2e-06 55.5 54 48.1
Sp4g07320 Schrenkiella parvula HOM05D000327 ORTHO05D000218 2.2e-06 55.5 51 47.1
Actinidia09193 Actinidia chinensis HOM05D000327 ORTHO05D000218 2.9e-06 55.1 53 47.2
Carub.0005s2027 Capsella rubella HOM05D000327 ORTHO05D000218 2.9e-06 55.1 51 45.1
Dinv25502 Davidia involucrata HOM05D000327 ORTHO05D000218 2.9e-06 55.1 54 44.4
Aa31LG5G9420 Aethionema arabicum HOM05D000327 ORTHO05D000218 3.8e-06 54.7 54 46.3
DCAR_011915 Daucus carota HOM05D000327 ORTHO05D000218 3.8e-06 54.7 51 49.0
Medtr2g044260 Medicago truncatula HOM05D000327 ORTHO05D000218 3.8e-06 54.7 50 46.0
Potri.018G064400 Populus trichocarpa HOM05D000327 ORTHO05D000218 3.8e-06 54.7 53 45.3
Ciclev10010720m.g Citrus clementina HOM05D000327 ORTHO05D000218 4.9e-06 54.3 54 48.1
Eucgr.C03191 Eucalyptus grandis HOM05D000327 ORTHO05D000218 4.9e-06 54.3 58 44.8
QL12p002130 Quercus lobata HOM05D000327 ORTHO05D000218 4.9e-06 54.3 55 47.3
Aqoxy7G04161 Aquilegia oxysepala HOM05D000327 ORTHO05D000218 6.4e-06 53.9 54 44.4
arahy.Tifrunner.gnm1.ann1.4DU4Q1 Arachis hypogaea HOM05D000327 ORTHO05D000218 6.4e-06 53.9 56 41.1
Lj4g0013845 Lotus japonicus HOM05D000327 ORTHO05D000218 6.4e-06 53.9 55 49.1
Atru.chr7.1777 Acer truncatum HOM05D000327 ORTHO05D000218 8.4e-06 53.5 54 44.4
Eucgr.G00196 Eucalyptus grandis HOM05D000327 ORTHO05D000218 8.4e-06 53.5 55 45.5
Glyma.09G074200 Glycine max HOM05D000327 ORTHO05D000218 8.4e-06 53.5 52 48.1
Glyma.U031125 Glycine max HOM05D000327 ORTHO05D000218 8.4e-06 53.5 52 50.0
Prupe.7G191200 Prunus persica HOM05D000327 ORTHO05D000218 8.4e-06 53.5 54 46.3


User provided reference genes

Program Settings