Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.7e-114 416.0 211 100.0
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 4.4e-70 268.5 216 64.4
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 3.0e-66 255.8 196 66.8
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 3.3e-65 252.3 206 64.1
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 5.0e-45 185.3 208 49.0
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 7.1e-44 181.4 206 50.5
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 6.7e-42 174.9 212 48.6
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.1e-39 167.5 190 48.9
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 2.0e-38 163.3 214 45.3
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 7.7e-30 134.8 203 40.9
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.4e-28 130.6 191 41.9
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 9.4e-28 127.9 189 41.3
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.2e-27 127.5 188 38.8
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.7e-27 126.3 192 40.1
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 3.6e-27 125.9 203 41.4
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 6.1e-27 125.2 189 45.0
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 1.8e-26 123.6 205 37.1
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.3e-26 123.2 194 40.2
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.1e-25 120.9 194 39.7
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.1e-25 120.9 201 39.8
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.1e-25 120.9 202 36.6
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.3e-25 119.4 189 40.7
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.4e-25 118.2 189 39.7
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 9.7e-25 117.9 216 41.2
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 9.7e-25 117.9 189 40.2
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 1.3e-24 117.5 204 36.8
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 2.2e-24 116.7 201 37.3
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.1e-23 114.4 194 39.2
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.8e-23 113.6 185 38.9
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 2.4e-23 113.2 196 41.3
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 3.1e-23 112.8 187 40.1
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 3.1e-23 112.8 203 38.4
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.2e-22 110.9 195 36.9
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.5e-22 110.5 187 35.3
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.5e-22 110.5 204 36.3
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 2.0e-22 110.2 201 39.8
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 2.0e-22 110.2 203 38.9
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 2.6e-22 109.8 201 38.3
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.6e-22 109.8 198 35.4
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 2.6e-22 109.8 192 38.5
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.5e-22 109.4 195 36.9
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.5e-22 109.4 197 36.0
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 4.5e-22 109.0 195 40.0
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 5.9e-22 108.6 195 36.9
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.3e-21 107.5 188 37.2
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.3e-21 107.5 198 36.9
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 2.9e-21 106.3 191 36.6
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 5.0e-21 105.5 193 34.7
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 6.5e-21 105.1 207 35.7
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 8.5e-21 104.8 184 35.9
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 8.5e-21 104.8 210 35.2
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 1.1e-20 104.4 222 39.2
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.9e-20 103.6 191 35.6
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 3.2e-20 102.8 205 35.6
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 4.2e-20 102.4 217 36.4
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 7.2e-20 101.7 188 36.2
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 9.4e-20 101.3 196 35.7
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 1.6e-19 100.5 217 37.8
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 2.1e-19 100.1 196 34.2
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.1e-19 100.1 192 34.9
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 2.1e-19 100.1 189 41.8
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 2.7e-19 99.8 222 32.4
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.7e-19 99.8 210 34.8
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 3.6e-19 99.4 193 34.2
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 4.7e-19 99.0 187 35.3
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 4.7e-19 99.0 213 31.9
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 6.1e-19 98.6 184 35.3
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 1.0e-18 97.8 191 36.1
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 1.0e-18 97.8 187 34.8
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.8e-18 97.1 193 34.2
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.8e-18 97.1 193 34.2
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.8e-18 97.1 204 40.2
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.3e-18 96.7 201 32.8
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 3.0e-18 96.3 184 35.9
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.0e-18 96.3 205 34.6
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 3.0e-18 96.3 200 32.0
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 4.0e-18 95.9 197 31.5
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 4.0e-18 95.9 199 32.7
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 5.2e-18 95.5 194 36.1
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 6.7e-18 95.1 193 34.7
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 6.7e-18 95.1 192 38.0
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 8.8e-18 94.7 201 32.3
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 8.8e-18 94.7 201 32.3
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.8e-18 94.7 202 35.6
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.1e-17 94.4 188 35.6
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 1.5e-17 94.0 200 33.0
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 1.5e-17 94.0 200 33.0
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-17 94.0 205 33.7
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 3.3e-17 92.8 201 32.3
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.4e-17 92.4 204 31.9
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-17 92.0 194 35.1
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 7.5e-17 91.7 186 36.6
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 9.7e-17 91.3 201 32.8
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 9.7e-17 91.3 201 32.8
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.7e-16 90.5 184 34.8
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.7e-16 90.5 183 35.0
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.7e-16 90.5 226 31.0
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.8e-16 89.7 206 34.5
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 3.7e-16 89.4 204 32.4
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 6.3e-16 88.6 183 30.6
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.8e-15 87.0 201 33.8
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.8e-15 87.0 201 33.8
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 2.4e-15 86.7 225 34.2
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 3.1e-15 86.3 196 33.7
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 4.1e-15 85.9 185 33.0
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 9.1e-15 84.7 186 35.5
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 9.1e-15 84.7 188 34.0
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.6e-14 84.0 193 34.7
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 2.0e-14 83.6 191 30.4
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.9e-14 82.0 193 31.1
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.0e-13 81.3 222 30.2
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.5e-13 78.6 186 32.3
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.5e-12 75.5 196 32.7
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 9.4e-12 74.7 216 31.5
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 1.2e-11 74.3 187 31.0
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 5.2e-10 68.9 185 35.7
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 6.8e-10 68.6 209 29.2
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 8.8e-10 68.2 85 40.0
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 8.8e-10 68.2 194 32.0
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.5e-09 67.4 186 28.5
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.7e-09 65.5 194 34.0
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 1.8e-07 60.5 200 28.0
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.7e-06 56.6 125 35.2


User provided reference genes

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