Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 2.0e-44 182.6 130 100.0
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 7.0e-34 147.5 114 96.5
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 5.6e-31 137.9 114 81.6
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 2.1e-30 136.0 114 89.5
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 2.3e-29 132.5 114 78.9
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 8.9e-29 130.6 114 72.8
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 1.5e-28 129.8 114 64.9
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 5.8e-28 127.9 114 64.0
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 2.9e-27 125.6 114 64.0
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 3.7e-27 125.2 114 71.1
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 6.4e-27 124.4 111 83.8
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 1.9e-26 122.9 107 83.2
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 1.9e-26 122.9 114 64.0
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 1.2e-25 120.2 111 82.0
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 2.1e-25 119.4 112 61.6
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 2.1e-25 119.4 107 74.8
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 3.5e-25 118.6 110 83.6
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 4.6e-25 118.2 111 82.0
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 6.0e-25 117.9 112 61.6
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 6.0e-25 117.9 113 72.6
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 7.8e-25 117.5 111 63.1
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.3e-24 116.7 111 58.6
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 1.3e-24 116.7 107 83.2
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 2.3e-24 115.9 111 59.5
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 3.0e-24 115.5 109 83.5
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 3.9e-24 115.2 114 59.6
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 5.1e-24 114.8 102 86.3
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 6.6e-24 114.4 101 65.3
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 8.6e-24 114.0 105 84.8
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 8.6e-24 114.0 102 71.6
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 1.1e-23 113.6 110 79.1
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.5e-23 113.2 110 81.8
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.5e-23 113.2 114 57.0
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.9e-23 112.8 107 83.2
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 1.9e-23 112.8 108 82.4
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 2.5e-23 112.5 98 65.3
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 2.5e-23 112.5 106 84.9
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 3.3e-23 112.1 102 86.3
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 3.3e-23 112.1 111 81.1
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 3.3e-23 112.1 110 55.5
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 3.3e-23 112.1 102 59.8
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.3e-23 112.1 111 82.9
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.3e-23 112.1 111 82.9
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 7.3e-23 110.9 97 86.6
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 7.3e-23 110.9 101 60.4
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.6e-22 109.8 107 58.9
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 1.6e-22 109.8 103 63.1
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.6e-22 109.8 99 61.6
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 2.8e-22 109.0 111 55.9
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 2.8e-22 109.0 102 64.7
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 4.7e-22 108.2 101 78.2
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 8.1e-22 107.5 101 57.4
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.4e-21 106.7 132 53.0
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 1.8e-21 106.3 114 53.5
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.8e-21 106.3 99 58.6
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 2.4e-21 105.9 100 59.0
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 2.4e-21 105.9 111 55.0
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 4.0e-21 105.1 102 79.4
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 4.0e-21 105.1 102 57.8
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 5.2e-21 104.8 106 59.4
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 5.2e-21 104.8 104 73.1
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 5.2e-21 104.8 111 55.9
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 5.2e-21 104.8 105 80.0
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 6.8e-21 104.4 106 58.5
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 8.9e-21 104.0 107 71.0
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 8.9e-21 104.0 107 57.0
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 1.2e-20 103.6 101 76.2
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 1.2e-20 103.6 102 56.9
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.2e-20 103.6 105 55.2
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 1.2e-20 103.6 105 55.2
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.5e-20 103.2 111 71.2
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 1.5e-20 103.2 95 87.4
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 1.5e-20 103.2 114 75.4
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.5e-20 103.2 107 54.2
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 2.6e-20 102.4 101 56.4
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 2.6e-20 102.4 101 56.4
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 3.4e-20 102.1 107 53.3
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 3.4e-20 102.1 106 53.8
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 4.4e-20 101.7 107 53.3
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 4.4e-20 101.7 101 71.3
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 5.8e-20 101.3 106 52.8
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 7.6e-20 100.9 111 71.2
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 7.6e-20 100.9 111 72.1
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 7.6e-20 100.9 101 56.4
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 9.9e-20 100.5 107 52.3
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 9.9e-20 100.5 106 52.8
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 9.9e-20 100.5 106 52.8
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 9.9e-20 100.5 112 72.3
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 9.9e-20 100.5 106 55.7
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 1.3e-19 100.1 114 73.7
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.3e-19 100.1 111 66.7
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 2.9e-19 99.0 111 54.1
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 3.8e-19 98.6 111 54.1
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 3.8e-19 98.6 103 53.4
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 3.8e-19 98.6 111 74.8
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 3.8e-19 98.6 99 57.6
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 4.9e-19 98.2 99 57.6
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 4.9e-19 98.2 95 58.9
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 6.4e-19 97.8 103 53.4
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 8.4e-19 97.4 108 54.6
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 8.4e-19 97.4 107 53.3
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.4e-18 96.7 101 53.5
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 2.4e-18 95.9 95 57.9
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 2.4e-18 95.9 95 57.9
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.2e-17 93.6 106 68.9
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.2e-17 93.6 106 68.9
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 1.3e-16 90.1 103 51.5
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 3.0e-16 89.0 100 49.0
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 5.1e-16 88.2 100 74.0
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 6.6e-16 87.8 112 49.1
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.5e-15 86.7 85 61.2
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 6.2e-14 81.3 190 33.7
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 6.2e-14 81.3 105 46.7
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 6.2e-14 81.3 104 48.1
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 8.1e-14 80.9 106 47.2
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.4e-13 80.1 105 45.7
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 4.0e-13 78.6 77 90.9
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 2.0e-12 76.3 108 41.7
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 3.4e-12 75.5 76 88.2
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 9.9e-12 73.9 79 50.6
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 4.2e-10 68.6 77 49.4
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 5.4e-10 68.2 80 82.5
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 7.1e-10 67.8 75 54.7
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 9.3e-10 67.4 101 41.6
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 1.2e-09 67.0 73 53.4
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 1.7e-08 63.2 36 88.9
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 4.3e-07 58.5 38 73.7


User provided reference genes

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