Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 0.0e+00 1178.7 626 100.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.3e-178 630.6 584 65.1
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 5.0e-178 628.6 568 64.6
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.0e-118 430.6 542 51.7
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.2e-110 404.8 568 47.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 4.5e-110 402.9 568 48.6
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 8.5e-109 398.7 554 48.6
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 5.3e-103 379.4 563 44.4
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.5e-97 361.3 566 45.1
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 7.7e-86 322.4 327 59.0
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 7.5e-73 279.3 386 49.2
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.0e-61 242.3 218 61.5
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 5.0e-53 213.4 612 32.8
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.4e-50 205.3 637 31.1
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.4e-49 200.7 529 34.4
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 4.6e-46 190.3 661 31.9
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.1e-44 185.7 598 31.1
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 8.9e-42 176.0 633 29.7
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.7e-40 170.6 361 38.5
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 4.1e-39 167.2 602 30.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.5e-38 164.1 601 30.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 7.8e-38 162.9 644 28.0
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.3e-37 162.2 468 33.1
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.9e-37 160.6 608 31.7
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 5.1e-37 160.2 491 32.6
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 7.3e-36 156.4 480 30.8
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.3e-36 156.4 626 29.1
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.2e-35 155.6 617 29.7
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.6e-35 155.2 629 28.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 3.6e-35 154.1 566 29.3
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.6e-35 154.1 339 33.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.4e-34 152.1 659 29.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.8e-34 151.8 524 30.7
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.8e-34 151.8 638 28.4
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 5.2e-34 150.2 648 28.5
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 5.8e-33 146.7 714 28.0
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 3.8e-32 144.1 644 28.6
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 4.9e-32 143.7 692 28.0
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.4e-32 143.3 658 28.3
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.4e-31 142.1 433 31.4
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.2e-31 141.0 683 27.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.1e-31 140.6 577 28.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 5.4e-31 140.2 477 31.0
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 9.2e-31 139.4 123 58.5
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-30 139.0 338 32.5
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-30 138.3 638 27.4
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.7e-30 137.9 466 32.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.6e-30 137.1 644 27.5
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 6.0e-30 136.7 465 30.1
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 6.0e-30 136.7 609 25.8
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.0e-29 134.4 639 27.4
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.9e-28 131.7 338 31.1
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.9e-28 131.7 544 28.1
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 4.3e-28 130.6 416 29.1
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.3e-28 130.6 338 30.8
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 9.6e-28 129.4 127 52.0
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.8e-27 127.9 667 26.4
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.8e-27 127.9 125 53.6
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.1e-26 125.9 594 28.3
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.4e-26 124.8 122 54.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.4e-26 124.8 403 31.8
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 2.0e-25 121.7 125 51.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.0e-25 121.7 648 25.6
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.6e-25 121.3 667 27.1
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.9e-25 119.4 647 27.4
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 6.4e-24 116.7 579 26.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 8.4e-24 116.3 574 26.8
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.4e-23 115.5 633 27.6
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.9e-23 115.2 121 47.9
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 4.2e-23 114.0 587 26.2
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 9.3e-23 112.8 161 42.9
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 2.7e-22 111.3 590 26.3
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.5e-22 110.9 403 30.0
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.6e-22 110.5 399 28.8
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.3e-21 109.0 449 29.6
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.7e-21 108.6 463 28.1
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.0e-21 107.8 101 52.5
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.5e-20 105.5 565 25.8
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 3.3e-20 104.4 204 40.7
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.1e-19 101.7 323 26.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.1e-18 99.4 648 25.9
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 3.1e-18 97.8 601 24.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 5.8e-17 93.6 559 25.6
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 5.8e-17 93.6 656 24.1
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 9.9e-17 92.8 495 25.9
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 2.2e-16 91.7 587 24.2
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 3.8e-16 90.9 601 25.8
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.8e-16 90.9 121 43.0
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 6.4e-16 90.1 292 29.8
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 3.2e-15 87.8 534 25.5
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.4e-15 87.0 143 37.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 7.1e-15 86.7 348 26.7
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 3.5e-14 84.3 549 22.6
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.5e-14 84.3 327 28.1
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 3.0e-13 81.3 135 35.6
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 5.1e-13 80.5 446 26.5
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 6.7e-13 80.1 566 22.8
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 3.3e-12 77.8 81 48.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.3e-11 75.9 140 35.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.3e-11 75.9 140 35.7
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.6e-11 75.5 66 56.1
Lalb_Chr08g0232031 Lupinus albus HOM05D006771 ORTHO05D008296 2.8e-11 74.7 64 62.5
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 1.1e-10 72.8 333 27.3
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 3.1e-10 71.2 127 34.6
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 4.0e-10 70.9 124 33.1
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.4e-07 62.4 321 24.6
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 5.5e-07 60.5 394 25.9
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 3.5e-06 57.8 64 40.6
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 7.9e-06 56.6 208 29.8


User provided reference genes

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