Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g038010 Medicago truncatula HOM05D003811 ORTHO05D004470 1.8e-163 579.3 314 100.0
Psat1g144040 Pisum sativum HOM05D003811 ORTHO05D004470 1.6e-100 370.2 316 68.0
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 2.3e-86 323.2 314 65.0
Ca_02108_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 2.4e-80 303.1 318 60.4
VMungo1215G0314 Vigna mungo HOM05D003811 ORTHO05D004470 4.5e-34 149.4 333 42.0
Glyma.15G166500 Glycine max HOM05D003811 ORTHO05D004470 4.2e-32 142.9 293 43.7
Glyma.13G100700 Glycine max HOM05D003811 ORTHO05D004470 6.1e-31 139.0 345 39.7
Psat4g013600 Pisum sativum HOM05D003811 ORTHO05D004470 1.0e-30 138.3 344 37.5
Glyma.09G059800 Glycine max HOM05D003811 ORTHO05D004470 3.9e-30 136.3 320 42.5
Glyma.17G059100 Glycine max HOM05D003811 ORTHO05D004470 1.9e-29 134.0 337 39.2
Cfa013454 Carpinus fangiana HOM05D003811 ORTHO05D004470 5.7e-29 132.5 347 38.6
Phvul.003G141200 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 1.3e-28 131.3 332 42.5
CSS0000053 Camellia sinensis var. sinensis HOM05D003811 ORTHO05D004470 1.6e-28 131.0 356 37.1
Duzib168G0111 Durio zibethinus HOM05D003811 ORTHO05D004470 1.4e-27 127.9 355 38.9
Ca_27932_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 2.4e-27 127.1 347 38.6
Manes.06G019300 Manihot esculenta HOM05D003811 ORTHO05D004470 5.3e-27 125.9 355 36.3
Thecc.09G186300 Theobroma cacao HOM05D003811 ORTHO05D004470 9.0e-27 125.2 355 40.6
GSVIVG01010855001 Vitis vinifera HOM05D003811 ORTHO05D004470 2.0e-26 124.0 337 40.1
arahy.Tifrunner.gnm1.ann1.0QJD35 Arachis hypogaea HOM05D003811 ORTHO05D004470 3.4e-26 123.2 356 35.7
Lalb_Chr07g0180651 Lupinus albus HOM05D003811 ORTHO05D004470 7.7e-26 122.1 313 36.7
Lalb_Chr13g0299991 Lupinus albus HOM05D003811 ORTHO05D004470 1.0e-25 121.7 344 36.3
arahy.Tifrunner.gnm1.ann1.YRC4PH Arachis hypogaea HOM05D003811 ORTHO05D004470 1.7e-25 120.9 356 35.4
Lalb_Chr12g0199621 Lupinus albus HOM05D003811 ORTHO05D004470 2.2e-25 120.6 314 36.9
CiPaw.07G197300 Carya illinoinensis HOM05D003811 ORTHO05D004470 3.8e-25 119.8 345 35.7
Rhsim01G0116800 Rhododendron simsii HOM05D003811 ORTHO05D004470 1.4e-24 117.9 341 35.5
Duzib150G1212 Durio zibethinus HOM05D003811 ORTHO05D004470 1.9e-24 117.5 357 37.8
Medtr4g127420 Medicago truncatula HOM05D003811 ORTHO05D004470 1.9e-24 117.5 341 34.6
FAN22G1182 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.2e-24 116.7 369 36.6
MELO3C003975.2 Cucumis melo HOM05D003811 ORTHO05D004470 1.2e-23 114.8 357 35.0
Lj4g0014027 Lotus japonicus HOM05D003811 ORTHO05D004470 1.6e-23 114.4 344 36.9
MD13G1239300 Malus domestica HOM05D003811 ORTHO05D004470 1.6e-23 114.4 369 34.4
CsaV3_2G008720 Cucumis sativus L. HOM05D003811 ORTHO05D004470 2.1e-23 114.0 354 35.6
TAR620G0001 Trochodendron aralioides HOM05D003811 ORTHO05D004470 2.7e-23 113.6 343 36.7
Cpa.g.sc95.8 Carica papaya HOM05D003811 ORTHO05D004470 6.1e-23 112.5 371 36.1
DCAR_018030 Daucus carota HOM05D003811 ORTHO05D004470 6.1e-23 112.5 357 34.7
ClCG11G011760 Citrullus lanatus HOM05D003811 ORTHO05D004470 1.0e-22 111.7 355 36.3
Sabra18G0116100 Salix brachista HOM05D003811 ORTHO05D004470 1.0e-22 111.7 378 33.3
FvH4_4g07270 Fragaria vesca HOM05D003811 ORTHO05D004470 1.4e-22 111.3 366 36.6
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 1.8e-22 110.9 340 34.7
Cc06_g20840 Coffea canephora HOM05D003811 ORTHO05D004470 2.3e-22 110.5 305 36.7
Sed0025374 Sechium edule HOM05D003811 ORTHO05D004470 2.3e-22 110.5 335 37.0
Dinv25445 Davidia involucrata HOM05D003811 ORTHO05D004470 3.0e-22 110.2 347 37.5
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.0e-22 110.2 367 36.5
FAN17G0360 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.0e-22 110.2 369 36.6
Potri.006G075200 Populus trichocarpa HOM05D003811 ORTHO05D004470 3.9e-22 109.8 379 34.6
DCAR_014667 Daucus carota HOM05D003811 ORTHO05D004470 6.7e-22 109.0 345 35.4
Oeu019552.1 Olea europaea HOM05D003811 ORTHO05D004470 1.5e-21 107.8 355 36.3
Aqoxy7G02811 Aquilegia oxysepala HOM05D003811 ORTHO05D004470 2.0e-21 107.5 352 33.8
TWI63G0214 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 2.0e-21 107.5 330 36.1
Eucgr.C00112 Eucalyptus grandis HOM05D003811 ORTHO05D004470 2.6e-21 107.1 342 36.0
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 2.6e-21 107.1 367 36.0
Phvul.009G236100 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 4.3e-21 106.3 260 37.7
Sc10g0001710 Simmondsia chinensis HOM05D003811 ORTHO05D004470 4.3e-21 106.3 341 33.7
TPR.G32975 Trifolium pratense HOM05D003811 ORTHO05D004470 7.4e-21 105.5 335 34.0
MD16G1248400 Malus domestica HOM05D003811 ORTHO05D004470 1.3e-20 104.8 373 33.8
Migut.L01879 Erythranthe guttata HOM05D003811 ORTHO05D004470 2.2e-20 104.0 335 34.3
vmacro05996 Vaccinium macrocarpon HOM05D003811 ORTHO05D004470 2.8e-20 103.6 354 37.3
Migut.J00797 Erythranthe guttata HOM05D003811 ORTHO05D004470 1.4e-19 101.3 352 34.1
Potri.018G142100 Populus trichocarpa HOM05D003811 ORTHO05D004470 1.4e-19 101.3 400 32.0
Oeu018819.1 Olea europaea HOM05D003811 ORTHO05D004470 1.8e-19 100.9 361 34.1
RcHm_v2.0_Chr4g0399481 Rosa chinensis HOM05D003811 ORTHO05D004470 1.8e-19 100.9 356 35.7
SalBow5G0957 Salvia bowleyana HOM05D003811 ORTHO05D004470 1.8e-19 100.9 329 34.3
Sed0004951 Sechium edule HOM05D003811 ORTHO05D004470 3.1e-19 100.1 340 33.2
TWI34G1601 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 3.1e-19 100.1 320 34.4
CARHR270970 Cardamine hirsuta HOM05D003811 ORTHO05D004470 9.1e-19 98.6 354 31.1
Hund13780 Selenicereus undatus HOM05D003811 ORTHO05D004470 1.2e-18 98.2 369 32.5
Ah.10g036890 Amaranthus hybridus HOM05D003811 ORTHO05D004470 2.0e-18 97.4 373 31.4
COL.COLO4_07099 Corchorus olitorius HOM05D003811 ORTHO05D004470 2.0e-18 97.4 351 35.0
MBI13_g34046_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 2.0e-18 97.4 335 34.9
SalBow5G4432 Salvia bowleyana HOM05D003811 ORTHO05D004470 2.0e-18 97.4 331 34.7
FvH4_6g24780 Fragaria vesca HOM05D003811 ORTHO05D004470 2.6e-18 97.1 359 35.1
Nitab4.5_0000491g0080 Nicotiana tabacum HOM05D003811 ORTHO05D004470 2.6e-18 97.1 352 30.7
EL10Ac2g04726 Beta vulgaris HOM05D003811 ORTHO05D004470 3.4e-18 96.7 390 33.8
C01p21610 Brassica napus HOM05D003811 ORTHO05D004470 5.9e-18 95.9 340 32.6
BolC1t02080H Brassica oleracea HOM05D003811 ORTHO05D004470 5.9e-18 95.9 340 32.6
CAN.G192.5 Capsicum annuum HOM05D003811 ORTHO05D004470 5.9e-18 95.9 379 32.5
FAN02G0923 Fragaria x ananassa HOM05D003811 ORTHO05D004470 5.9e-18 95.9 358 34.6
BcaC09g50723 Brassica carinata HOM05D003811 ORTHO05D004470 1.0e-17 95.1 340 32.6
Ciclev10008308m.g Citrus clementina HOM05D003811 ORTHO05D004470 1.3e-17 94.7 376 33.2
Lj5C615T3 Lonicera japonica HOM05D003811 ORTHO05D004470 1.3e-17 94.7 371 33.4
Atru.chr7.754 Acer truncatum HOM05D003811 ORTHO05D004470 2.2e-17 94.0 326 31.6
Atru.chr7.775 Acer truncatum HOM05D003811 ORTHO05D004470 2.2e-17 94.0 326 31.6
BcaC04g19992 Brassica carinata HOM05D003811 ORTHO05D004470 2.2e-17 94.0 314 32.8
AT5G57180 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 2.9e-17 93.6 286 32.2
Hma1.2p1_1326F.1_g275850 Hydrangea macrophylla HOM05D003811 ORTHO05D004470 2.9e-17 93.6 344 36.3
Peaxi162Scf01038g00011 Petunia axillaris HOM05D003811 ORTHO05D004470 3.8e-17 93.2 363 32.0
AL8G33110 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 5.0e-17 92.8 352 31.0
C09p49010 Brassica napus HOM05D003811 ORTHO05D004470 5.0e-17 92.8 314 32.8
MBI16_g05834_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 6.5e-17 92.4 336 33.6
Oeu006847.1 Olea europaea HOM05D003811 ORTHO05D004470 8.5e-17 92.0 350 32.6
Solyc07g008540.3 Solanum lycopersicum HOM05D003811 ORTHO05D004470 8.5e-17 92.0 371 32.6
BolC9t57752H Brassica oleracea HOM05D003811 ORTHO05D004470 1.1e-16 91.7 314 32.2
Dinv41179 Davidia involucrata HOM05D003811 ORTHO05D004470 1.1e-16 91.7 342 31.9
Lj5C612T1 Lonicera japonica HOM05D003811 ORTHO05D004470 1.1e-16 91.7 361 32.7
Prupe.1G074900 Prunus persica HOM05D003811 ORTHO05D004470 1.9e-16 90.9 383 32.9
Rhsim03G0266200 Rhododendron simsii HOM05D003811 ORTHO05D004470 1.9e-16 90.9 353 35.7
Sabra06G0055900 Salix brachista HOM05D003811 ORTHO05D004470 1.9e-16 90.9 362 34.3
Sopen07g004460 Solanum pennellii HOM05D003811 ORTHO05D004470 1.9e-16 90.9 381 32.5
BcaB08g36076 Brassica carinata HOM05D003811 ORTHO05D004470 3.2e-16 90.1 327 31.8
Lsat_1_v5_gn_8_69001 Lactuca sativa HOM05D003811 ORTHO05D004470 4.2e-16 89.7 304 32.9
Nitab4.5_0000949g0010 Nicotiana tabacum HOM05D003811 ORTHO05D004470 5.5e-16 89.4 364 32.7
Thhalv10025322m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 7.2e-16 89.0 359 30.1
QL02p046940 Quercus lobata HOM05D003811 ORTHO05D004470 7.2e-16 89.0 363 34.2
PGSC0003DMG400022983 Solanum tuberosum HOM05D003811 ORTHO05D004470 1.2e-15 88.2 374 32.6
Nitab4.5_0000949g0020 Nicotiana tabacum HOM05D003811 ORTHO05D004470 1.6e-15 87.8 352 33.2
Hund16072 Selenicereus undatus HOM05D003811 ORTHO05D004470 2.1e-15 87.4 387 30.0
BcaNung03775 Brassica carinata HOM05D003811 ORTHO05D004470 6.1e-15 85.9 271 35.4
AUR62040721 Chenopodium quinoa HOM05D003811 ORTHO05D004470 6.1e-15 85.9 360 33.1
Lsat_1_v5_gn_7_56240 Lactuca sativa HOM05D003811 ORTHO05D004470 6.1e-15 85.9 356 34.0
Nn8g40778 Nelumbo nucifera HOM05D003811 ORTHO05D004470 6.1e-15 85.9 344 32.6
PGR001G0001 Punica granatum HOM05D003811 ORTHO05D004470 6.1e-15 85.9 343 34.7
BraA01t01681Z Brassica rapa HOM05D003811 ORTHO05D004470 1.0e-14 85.1 330 31.8
Gohir.A05G002200 Gossypium hirsutum HOM05D003811 ORTHO05D004470 1.8e-14 84.3 334 30.2
Gohir.D05G002600 Gossypium hirsutum HOM05D003811 ORTHO05D004470 1.8e-14 84.3 339 31.6
Oeu034800.1 Olea europaea HOM05D003811 ORTHO05D004470 1.8e-14 84.3 353 29.5
Thhalv10013517m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 3.9e-14 83.2 377 30.2
Gorai.009G002400 Gossypium raimondii HOM05D003811 ORTHO05D004470 5.2e-14 82.8 339 31.6
MSTRG.10438 Avicennia marina HOM05D003811 ORTHO05D004470 8.8e-14 82.0 348 31.3
MSTRG.26548 Avicennia marina HOM05D003811 ORTHO05D004470 8.8e-14 82.0 343 31.5
A01p17250 Brassica napus HOM05D003811 ORTHO05D004470 1.1e-13 81.6 330 31.2
CARHR233500 Cardamine hirsuta HOM05D003811 ORTHO05D004470 1.1e-13 81.6 285 31.6
ECA240G2391 Erigeron canadensis HOM05D003811 ORTHO05D004470 1.1e-13 81.6 350 33.7
Manes.14G159300 Manihot esculenta HOM05D003811 ORTHO05D004470 1.1e-13 81.6 347 32.9
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 1.5e-13 81.3 375 30.7
PSO170G1122 Papaver somniferum HOM05D003811 ORTHO05D004470 1.5e-13 81.3 351 32.8
A10p14570 Brassica napus HOM05D003811 ORTHO05D004470 2.6e-13 80.5 304 32.2
CDE06G2566 Ceratophyllum demersum HOM05D003811 ORTHO05D004470 4.4e-13 79.7 321 36.8
BraA10t43544Z Brassica rapa HOM05D003811 ORTHO05D004470 5.7e-13 79.3 307 31.9
PSO063G0992 Papaver somniferum HOM05D003811 ORTHO05D004470 5.7e-13 79.3 355 33.2
Sp6g18910 Schrenkiella parvula HOM05D003811 ORTHO05D004470 7.4e-13 79.0 385 29.4
AL7G27010 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 9.7e-13 78.6 350 29.7
AUR62012114 Chenopodium quinoa HOM05D003811 ORTHO05D004470 9.7e-13 78.6 359 32.0
Sp7g24010 Schrenkiella parvula HOM05D003811 ORTHO05D004470 1.7e-12 77.8 270 31.5
Aa31LG3G13080 Aethionema arabicum HOM05D003811 ORTHO05D004470 3.7e-12 76.6 306 29.4
BcaC06g32778 Brassica carinata HOM05D003811 ORTHO05D004470 3.7e-12 76.6 345 31.0
AT4G25990 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 6.3e-12 75.9 258 32.6
A02p08670 Brassica napus HOM05D003811 ORTHO05D004470 1.1e-11 75.1 356 30.1
Lsat_1_v5_gn_5_83141 Lactuca sativa HOM05D003811 ORTHO05D004470 1.1e-11 75.1 351 29.9
HanXRQChr09g0245431 Helianthus annuus HOM05D003811 ORTHO05D004470 1.4e-11 74.7 379 28.5
Actinidia38496 Actinidia chinensis HOM05D003811 ORTHO05D004470 1.8e-11 74.3 165 40.6
BraA02t05937Z Brassica rapa HOM05D003811 ORTHO05D004470 1.8e-11 74.3 352 29.8
Carub.0007s1496 Capsella rubella HOM05D003811 ORTHO05D004470 2.4e-11 73.9 352 31.0
Carub.0008s1769 Capsella rubella HOM05D003811 ORTHO05D004470 5.3e-11 72.8 309 31.1
HanXRQChr03g0065501 Helianthus annuus HOM05D003811 ORTHO05D004470 9.1e-11 72.0 410 27.3
BcaB05g22326 Brassica carinata HOM05D003811 ORTHO05D004470 1.2e-10 71.6 376 29.0
BcaC03g14176 Brassica carinata HOM05D003811 ORTHO05D004470 1.0e-09 68.6 345 29.0
C02p14510 Brassica napus HOM05D003811 ORTHO05D004470 1.0e-09 68.6 345 29.0
BolC2t07575H Brassica oleracea HOM05D003811 ORTHO05D004470 1.0e-09 68.6 345 29.0
BraA03t14705Z Brassica rapa HOM05D003811 ORTHO05D004470 1.0e-09 68.6 345 29.0
SGA_v2.0_scaffold511G52626 Striga asiatica HOM05D003811 ORTHO05D004470 2.2e-09 67.4 318 30.5
CiPaw.08G032400 Carya illinoinensis HOM05D003811 ORTHO05D004470 2.9e-09 67.0 343 30.6
HPP92_010287 Vanilla planifolia HOM05D003811 ORTHO05D004470 8.5e-09 65.5 337 29.1
Eucgr.C02219 Eucalyptus grandis HOM05D003811 ORTHO05D004470 1.5e-08 64.7 358 29.9
HanXRQChr05g0141071 Helianthus annuus HOM05D003811 ORTHO05D004470 1.9e-08 64.3 322 33.5
BolC7t45947H Brassica oleracea HOM05D003811 ORTHO05D004470 9.4e-08 62.0 356 26.4
HanXRQChr10g0308851 Helianthus annuus HOM05D003811 ORTHO05D004470 9.4e-08 62.0 359 30.9
C07p54590 Brassica napus HOM05D003811 ORTHO05D004470 1.2e-07 61.6 356 27.2
Oeu064847.1 Olea europaea HOM05D003811 ORTHO05D004470 2.7e-07 60.5 123 40.7
ECA236G3708 Erigeron canadensis HOM05D003811 ORTHO05D004470 3.6e-07 60.1 153 34.0
A03p56350 Brassica napus HOM05D003811 ORTHO05D004470 6.1e-07 59.3 195 33.8
FAN05G4809 Fragaria x ananassa HOM05D003811 ORTHO05D004470 6.1e-07 59.3 181 32.6
SGA_v2.0_scaffold31G12764 Striga asiatica HOM05D003811 ORTHO05D004470 1.0e-06 58.5 209 35.4
HPP92_017127 Vanilla planifolia HOM05D003811 ORTHO05D004470 1.0e-06 58.5 353 30.3
unitig_22.g5159 Utricularia gibba HOM05D003811 ORTHO05D004470 2.3e-06 57.4 294 30.6
unitig_8.g4051 Utricularia gibba HOM05D003811 ORTHO05D004470 3.0e-06 57.0 315 29.2
ATR0626G357 Amborella trichopoda HOM05D003811 ORTHO05D004470 8.8e-06 55.5 102 43.1


User provided reference genes

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