Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g037525 Medicago truncatula HOM05D009822 ORTHO05D011160 7.0e-71 270.4 127 100.0
Medtr2g037565 Medicago truncatula HOM05D009822 ORTHO05D011160 9.2e-55 216.9 131 78.6
Psat1g144880 Pisum sativum HOM05D009822 ORTHO05D011160 2.5e-36 155.6 121 58.7
Medtr2g037250 Medicago truncatula HOM05D009822 ORTHO05D011160 3.7e-35 151.8 110 60.9
Psat1g145080 Pisum sativum HOM05D009822 ORTHO05D011160 1.3e-32 143.3 120 50.0
Medtr2g037200 Medicago truncatula HOM05D009822 ORTHO05D011160 2.1e-30 136.0 128 51.6
Medtr2g037300 Medicago truncatula HOM05D009822 ORTHO05D011160 6.7e-29 131.0 131 50.4
TPR.G29607 Trifolium pratense HOM05D009822 ORTHO05D011160 1.0e-24 117.1 87 65.5
Psat0s3712g0120 Pisum sativum HOM05D009822 ORTHO05D011160 2.9e-24 115.5 120 43.3
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 3.2e-23 112.1 122 39.3
Medtr2g037345 Medicago truncatula HOM05D009822 ORTHO05D011160 3.5e-22 108.6 129 44.2
Medtr2g037330 Medicago truncatula HOM05D009822 ORTHO05D011160 4.6e-22 108.2 130 42.3
Medtr2g037255 Medicago truncatula HOM05D009822 ORTHO05D011160 5.1e-21 104.8 131 41.2
Psat6g103440 Pisum sativum HOM05D009822 ORTHO05D011160 1.5e-20 103.2 122 39.3
Medtr2g037320 Medicago truncatula HOM05D009822 ORTHO05D011160 3.3e-20 102.1 131 38.9
Medtr2g037400 Medicago truncatula HOM05D009822 ORTHO05D011160 5.7e-20 101.3 124 39.5
Medtr2g037380 Medicago truncatula HOM05D009822 ORTHO05D011160 1.6e-19 99.8 131 39.7
Medtr2g037500 Medicago truncatula HOM05D009822 ORTHO05D011160 4.1e-18 95.1 88 45.5
Medtr3g049925 Medicago truncatula HOM05D013240 ORTHO05D011160 7.6e-17 90.9 130 36.9
Psat1g145040 Pisum sativum HOM05D009822 ORTHO05D011160 1.3e-16 90.1 82 53.7
Medtr2g037445 Medicago truncatula HOM05D009822 ORTHO05D011160 8.5e-16 87.4 129 38.0
Medtr2g037370 Medicago truncatula HOM05D009822 ORTHO05D011160 7.2e-15 84.3 123 39.0
Medtr2g041360 Medicago truncatula HOM05D009822 ORTHO05D011160 2.1e-14 82.8 125 36.8
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 1.8e-13 79.7 128 35.9
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 5.7e-12 74.7 120 35.0
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.3e-11 73.6 122 33.6
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 6.3e-11 71.2 129 31.8
Medtr2g043160 Medicago truncatula HOM05D013240 ORTHO05D011160 8.2e-11 70.9 128 30.5
Medtr2g037505 Medicago truncatula HOM05D009822 ORTHO05D011160 2.4e-10 69.3 107 30.8
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 5.3e-10 68.2 127 33.1
Gorai.004G026200 Gossypium raimondii HOM05D009688 ORTHO05D005549 6.9e-10 67.8 121 33.1
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.5e-09 66.6 119 33.6
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 2.0e-09 66.2 126 33.3
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 5.9e-09 64.7 113 31.0
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.0e-08 63.9 115 33.9
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.0e-08 61.6 123 32.5
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 6.5e-08 61.2 115 34.8
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 6.5e-08 61.2 115 34.8
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 6.5e-08 61.2 125 33.6
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 6.5e-08 61.2 115 34.8
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 6.5e-08 61.2 125 33.6
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 8.5e-08 60.8 126 29.4
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 1.9e-07 59.7 131 32.8
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 3.2e-07 58.9 102 31.4
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.2e-07 58.5 128 30.5
TPR.G7879 Trifolium pratense HOM05D018581 ORTHO05D005549 4.2e-07 58.5 111 31.5
Gohir.D08G029175 Gossypium hirsutum HOM05D009688 ORTHO05D005549 5.5e-07 58.2 110 30.0
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 7.2e-07 57.8 125 34.4
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 7.2e-07 57.8 125 34.4
TPR.G30230 Trifolium pratense HOM05D018581 ORTHO05D005549 7.2e-07 57.8 125 31.2
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 9.4e-07 57.4 111 34.2
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 1.2e-06 57.0 112 34.8
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 1.6e-06 56.6 126 29.4
Gorai.004G026500 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.6e-06 56.6 95 30.5
Psat1g145120 Pisum sativum HOM05D009822 ORTHO05D011160 1.6e-06 56.6 57 45.6
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 2.1e-06 56.2 104 29.8
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 3.6e-06 55.5 127 29.1
Potri.018G133200 Populus trichocarpa HOM05D009688 ORTHO05D005549 3.6e-06 55.5 126 31.7
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 4.7e-06 55.1 117 31.6
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 6.1e-06 54.7 126 33.3
Cpa.g.sc95.33 Carica papaya HOM05D009688 ORTHO05D005549 6.1e-06 54.7 124 31.5
Gohir.A08G018508 Gossypium hirsutum HOM05D009688 ORTHO05D005549 6.1e-06 54.7 95 30.5
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 7.9e-06 54.3 126 29.4
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 7.9e-06 54.3 124 29.8


User provided reference genes

Program Settings