Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g037380 Medicago truncatula HOM05D009822 ORTHO05D011160 1.8e-74 282.3 130 100.0
Medtr2g037320 Medicago truncatula HOM05D009822 ORTHO05D011160 3.7e-51 204.9 128 68.8
Medtr2g037255 Medicago truncatula HOM05D009822 ORTHO05D011160 4.5e-49 198.0 130 65.4
Medtr2g037400 Medicago truncatula HOM05D009822 ORTHO05D011160 1.2e-46 189.9 130 63.8
Medtr2g037345 Medicago truncatula HOM05D009822 ORTHO05D011160 1.1e-42 176.8 131 60.3
Medtr2g037330 Medicago truncatula HOM05D009822 ORTHO05D011160 9.2e-42 173.7 130 61.5
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 4.0e-37 158.3 126 57.1
Medtr2g037370 Medicago truncatula HOM05D009822 ORTHO05D011160 7.0e-34 147.5 130 55.4
Psat1g144880 Pisum sativum HOM05D009822 ORTHO05D011160 4.7e-30 134.8 128 48.4
Psat1g145080 Pisum sativum HOM05D009822 ORTHO05D011160 1.8e-29 132.9 128 44.5
Medtr2g037200 Medicago truncatula HOM05D009822 ORTHO05D011160 3.1e-29 132.1 128 46.1
Medtr2g037250 Medicago truncatula HOM05D009822 ORTHO05D011160 1.2e-25 120.2 110 43.6
Medtr2g037300 Medicago truncatula HOM05D009822 ORTHO05D011160 1.1e-23 113.6 128 46.1
Psat0s3712g0120 Pisum sativum HOM05D009822 ORTHO05D011160 3.6e-22 108.6 131 39.7
Medtr2g037525 Medicago truncatula HOM05D009822 ORTHO05D011160 3.4e-20 102.1 131 39.7
Medtr2g037565 Medicago truncatula HOM05D009822 ORTHO05D011160 4.4e-20 101.7 133 40.6
TPR.G29607 Trifolium pratense HOM05D009822 ORTHO05D011160 5.4e-18 94.7 87 56.3
Psat1g145040 Pisum sativum HOM05D009822 ORTHO05D011160 3.6e-14 82.0 94 43.6
Medtr2g041360 Medicago truncatula HOM05D009822 ORTHO05D011160 1.4e-10 70.1 131 34.4
TPR.G36444 Trifolium pratense HOM05D013240 ORTHO05D011160 1.9e-10 69.7 130 34.6
Medtr2g043120 Medicago truncatula HOM05D013240 ORTHO05D011160 2.1e-09 66.2 131 33.6
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.1e-09 66.2 122 32.8
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 6.0e-09 64.7 121 32.2
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 7.8e-09 64.3 109 35.8
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.0e-08 63.9 132 30.3
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.3e-08 63.5 109 35.8
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.3e-08 62.8 115 37.4
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 3.0e-08 62.4 123 29.3
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.9e-08 62.0 110 39.1
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 5.1e-08 61.6 116 31.9
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 5.1e-08 61.6 128 30.5
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 6.6e-08 61.2 116 31.9
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.5e-07 60.1 124 29.8
Gohir.D08G029000 Gossypium hirsutum HOM05D009688 ORTHO05D005549 3.3e-07 58.9 121 28.1
Gorai.004G026100 Gossypium raimondii HOM05D009688 ORTHO05D005549 3.3e-07 58.9 121 28.1
Medtr2g037475 Medicago truncatula HOM05D009822 ORTHO05D011160 3.3e-07 58.9 131 30.5
Medtr2g037505 Medicago truncatula HOM05D009822 ORTHO05D011160 4.3e-07 58.5 111 31.5
Medtr2g043100 Medicago truncatula HOM05D013240 ORTHO05D011160 4.3e-07 58.5 127 29.9
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.3e-06 57.0 104 29.8
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.1e-06 56.2 124 30.6


User provided reference genes

Program Settings