Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g037190 Medicago truncatula HOM05D018581 ORTHO05D005549 5.0e-72 274.2 129 100.0
Medtr2g037085 Medicago truncatula HOM05D018581 ORTHO05D005549 4.1e-42 174.9 131 67.2
TPR.G7879 Trifolium pratense HOM05D018581 ORTHO05D005549 1.8e-37 159.5 116 59.5
TPR.G7878 Trifolium pratense HOM05D018581 ORTHO05D005549 4.4e-36 154.8 92 69.6
Medtr2g037105 Medicago truncatula HOM05D018581 ORTHO05D005549 2.8e-30 135.6 131 53.4
Medtr2g037665 Medicago truncatula HOM05D018581 ORTHO05D005549 1.4e-26 123.2 131 51.1
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 3.0e-21 105.5 117 43.6
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 6.8e-21 104.4 108 42.6
TPR.G30230 Trifolium pratense HOM05D018581 ORTHO05D005549 2.0e-20 102.8 129 42.6
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 9.8e-20 100.5 121 43.0
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.1e-18 97.1 129 41.1
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 8.0e-14 80.9 129 37.2
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 2.3e-13 79.3 129 37.2
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.3e-13 79.3 127 39.4
Sabra18G0112900 Salix brachista HOM05D009688 ORTHO05D005549 1.2e-12 77.0 123 36.6
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 1.7e-11 73.2 129 35.7
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 2.9e-11 72.4 95 42.1
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 8.3e-11 70.9 129 35.7
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 1.1e-10 70.5 124 31.5
Gorai.004G026200 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.1e-10 70.5 135 34.8
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.4e-10 69.3 128 35.9
Gohir.D08G029100 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.4e-10 69.3 135 35.6
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.2e-10 68.9 131 32.1
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 4.1e-10 68.6 133 30.8
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 4.1e-10 68.6 139 32.4
Potri.018G133200 Populus trichocarpa HOM05D009688 ORTHO05D005549 5.4e-10 68.2 127 30.7
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 7.0e-10 67.8 134 32.8
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 9.2e-10 67.4 91 44.0
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 9.2e-10 67.4 141 32.6
Gohir.A08G018500 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.7e-09 65.9 135 34.8
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 4.6e-09 65.1 128 34.4
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 4.6e-09 65.1 128 34.4
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 6.0e-09 64.7 90 36.7
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 6.0e-09 64.7 132 32.6
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 6.0e-09 64.7 132 32.6
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 7.8e-09 64.3 127 30.7
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 1.0e-08 63.9 127 33.9
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 1.0e-08 63.9 127 33.9
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.3e-08 63.5 135 34.1
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.3e-08 62.8 127 29.9
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 2.3e-08 62.8 132 31.8
Gohir.D08G029000 Gossypium hirsutum HOM05D009688 ORTHO05D005549 3.9e-08 62.0 135 34.1
Gorai.004G026100 Gossypium raimondii HOM05D009688 ORTHO05D005549 3.9e-08 62.0 135 34.1
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 5.0e-08 61.6 128 34.4
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 8.6e-08 60.8 128 34.4
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.1e-07 60.5 106 36.8
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 1.5e-07 60.1 111 35.1
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 1.9e-07 59.7 134 31.3
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 2.5e-07 59.3 127 32.3
Prupe.1G078000 Prunus persica HOM05D006945 ORTHO05D005549 2.5e-07 59.3 78 38.5
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 4.3e-07 58.5 138 31.2
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.3e-07 58.5 106 35.8
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 7.3e-07 57.8 134 32.1
Phvul.009G237500 Phaseolus vulgaris HOM05D006945 ORTHO05D005549 7.3e-07 57.8 129 31.0
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.5e-07 57.4 109 34.9
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 2.1e-06 56.2 134 26.9
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-06 55.8 129 32.6
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-06 55.8 131 32.1
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 2.8e-06 55.8 129 32.6
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 2.8e-06 55.8 131 32.1
TPR.G36444 Trifolium pratense HOM05D013240 ORTHO05D011160 2.8e-06 55.8 132 32.6
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 3.6e-06 55.5 131 32.1
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 3.6e-06 55.5 131 32.1
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 6.2e-06 54.7 133 31.6
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 6.2e-06 54.7 133 31.6
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 8.1e-06 54.3 133 31.6
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 8.1e-06 54.3 133 31.6


User provided reference genes

Program Settings