Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g036670 Medicago truncatula HOM05D007765 ORTHO05D009826 1.3e-94 349.7 180 100.0
TPR.G9240 Trifolium pratense HOM05D007765 ORTHO05D009826 4.6e-76 288.1 175 85.1
VMungo1309G2639 Vigna mungo HOM05D007765 ORTHO05D009826 2.7e-44 182.6 194 57.2
Lj4g0004123 Lotus japonicus HOM05D007765 ORTHO05D009826 6.1e-44 181.4 209 54.1
Glyma.15G162800 Glycine max HOM05D007765 ORTHO05D009826 1.4e-43 180.3 193 54.9
Glyma.09G056600 Glycine max HOM05D007765 ORTHO05D009826 1.2e-42 177.2 204 52.9
Lalb_Chr20g0116301 Lupinus albus HOM05D007765 ORTHO05D009826 2.0e-42 176.4 214 49.1
Phvul.003G143700 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 1.1e-40 170.6 212 50.9
Phvul.009G238800 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 2.4e-40 169.5 193 56.0
Lalb_Chr18g0052451 Lupinus albus HOM05D007765 ORTHO05D009826 4.1e-40 168.7 180 53.9
Glyma.17G061700 Glycine max HOM05D007765 ORTHO05D009826 7.7e-39 164.5 201 49.8
Lalb_Chr12g0199471 Lupinus albus HOM05D007765 ORTHO05D009826 1.7e-38 163.3 175 52.6
Glyma.13G098000 Glycine max HOM05D007765 ORTHO05D009826 2.9e-38 162.5 208 48.6
Psat1g146600 Pisum sativum HOM05D007765 ORTHO05D009826 2.5e-37 159.5 99 82.8
Lj6g0023329 Lotus japonicus HOM05D007765 ORTHO05D009826 7.2e-37 157.9 175 53.7
arahy.Tifrunner.gnm1.ann1.8SXC5S Arachis hypogaea HOM05D007765 ORTHO05D009826 1.4e-35 153.7 177 53.1
arahy.Tifrunner.gnm1.ann1.YM1G3Q Arachis hypogaea HOM05D007765 ORTHO05D009826 2.6e-34 149.4 188 49.5
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 3.4e-34 149.1 175 48.6
TPR.G5381 Trifolium pratense HOM05D007765 ORTHO05D009826 3.7e-33 145.6 176 50.0
Medtr4g127700 Medicago truncatula HOM05D007765 ORTHO05D009826 5.5e-29 131.7 168 47.0
Dinv41219 Davidia involucrata HOM05D007765 ORTHO05D009826 1.1e-24 117.5 202 37.6
CiPaw.07G194200 Carya illinoinensis HOM05D007765 ORTHO05D009826 3.1e-24 115.9 225 33.8
QL11p005142 Quercus lobata HOM05D007765 ORTHO05D009826 3.5e-23 112.5 217 37.3
Duzib150G0923 Durio zibethinus HOM05D007765 ORTHO05D009826 5.9e-23 111.7 223 35.0
VMungo1215G1692 Vigna mungo HOM05D007765 ORTHO05D009826 7.8e-23 111.3 167 43.7
Gohir.D13G216400 Gossypium hirsutum HOM05D007765 ORTHO05D009826 2.3e-22 109.8 171 39.8
Gorai.013G246700 Gossypium raimondii HOM05D007765 ORTHO05D009826 2.9e-22 109.4 171 39.8
COL.COLO4_36375 Corchorus olitorius HOM05D007765 ORTHO05D009826 3.8e-22 109.0 194 38.7
TAR383G0713 Trochodendron aralioides HOM05D007765 ORTHO05D009826 3.8e-22 109.0 218 33.5
Gohir.A13G212300 Gossypium hirsutum HOM05D007765 ORTHO05D009826 8.6e-22 107.8 171 39.2
RcHm_v2.0_Chr4g0400891 Rosa chinensis HOM05D007765 ORTHO05D009826 4.3e-21 105.5 193 37.8
FAN17G2229 Fragaria x ananassa HOM05D007765 ORTHO05D009826 5.6e-21 105.1 202 34.2
Sp3g32420 Schrenkiella parvula HOM05D007765 ORTHO05D009826 5.6e-21 105.1 176 38.6
Carub.0007s1043 Capsella rubella HOM05D007765 ORTHO05D009826 2.8e-20 102.8 177 38.4
FvH4_4g07800 Fragaria vesca HOM05D007765 ORTHO05D009826 4.7e-20 102.1 203 34.0
FAN12G2617 Fragaria x ananassa HOM05D007765 ORTHO05D009826 8.0e-20 101.3 203 34.0
FAN22G0698 Fragaria x ananassa HOM05D007765 ORTHO05D009826 8.0e-20 101.3 202 34.2
MBI14_g08141_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 8.0e-20 101.3 228 33.3
Carub.0003s3320 Capsella rubella HOM05D007765 ORTHO05D009826 1.0e-19 100.9 179 36.9
Potri.018G090200 Populus trichocarpa HOM05D007765 ORTHO05D009826 1.0e-19 100.9 208 36.1
Sabra18G0077700 Salix brachista HOM05D007765 ORTHO05D009826 1.4e-19 100.5 205 34.6
Atru.chr7.847 Acer truncatum HOM05D007765 ORTHO05D009826 2.3e-19 99.8 204 34.3
CARHR238080 Cardamine hirsuta HOM05D007765 ORTHO05D009826 3.0e-19 99.4 175 36.6
FAN07G1496 Fragaria x ananassa HOM05D007765 ORTHO05D009826 3.0e-19 99.4 202 33.7
BcaNung04419 Brassica carinata HOM05D007765 ORTHO05D009826 4.0e-19 99.0 179 35.8
BolC9t54340H Brassica oleracea HOM05D007765 ORTHO05D009826 1.2e-18 97.4 170 38.8
A09p12150 Brassica napus HOM05D007765 ORTHO05D009826 1.5e-18 97.1 170 38.2
C09p14370 Brassica napus HOM05D007765 ORTHO05D009826 1.5e-18 97.1 170 38.2
BraA09t36859Z Brassica rapa HOM05D007765 ORTHO05D009826 1.5e-18 97.1 170 38.2
BcaC04g22872 Brassica carinata HOM05D007765 ORTHO05D009826 2.6e-18 96.3 170 38.8
Thhalv10026906m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 2.6e-18 96.3 177 35.6
Thhalv10022885m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 4.4e-18 95.5 176 36.4
AL3G52940 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 5.7e-18 95.1 170 35.3
Sp7g28050 Schrenkiella parvula HOM05D007765 ORTHO05D009826 5.7e-18 95.1 178 36.0
THA.LOC104819971 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 7.5e-18 94.7 181 37.0
THA.LOC104803946 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 1.7e-17 93.6 183 39.3
A01p07960 Brassica napus HOM05D007765 ORTHO05D009826 2.9e-17 92.8 175 35.4
BraA01t00741Z Brassica rapa HOM05D007765 ORTHO05D009826 4.9e-17 92.0 175 34.9
AL7G22010 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 6.4e-17 91.7 172 33.1
BcaB03g12635 Brassica carinata HOM05D007765 ORTHO05D009826 1.1e-16 90.9 175 35.4
BcaB07g31628 Brassica carinata HOM05D007765 ORTHO05D009826 1.4e-16 90.5 170 37.6
AT2G18969 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 2.4e-16 89.7 175 32.6
AT4G30180 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 1.2e-15 87.4 175 33.7
Dinv19560 Davidia involucrata HOM05D007765 ORTHO05D009826 1.2e-15 87.4 201 32.3
BcaC09g51800 Brassica carinata HOM05D007765 ORTHO05D009826 2.7e-15 86.3 178 34.8
C01p08880 Brassica napus HOM05D007765 ORTHO05D009826 2.7e-15 86.3 178 34.8
BolC1t00878H Brassica oleracea HOM05D007765 ORTHO05D009826 2.7e-15 86.3 178 34.8
Sed0013776 Sechium edule HOM05D007765 ORTHO05D009826 2.7e-15 86.3 172 30.2
ClCG11G011990 Citrullus lanatus HOM05D007765 ORTHO05D009826 7.8e-15 84.7 183 31.7
Prupe.1G081900 Prunus persica HOM05D007765 ORTHO05D009826 7.8e-15 84.7 194 33.0
CsaV3_2G008530 Cucumis sativus L. HOM05D007765 ORTHO05D009826 1.7e-14 83.6 180 33.3
CARHR109510 Cardamine hirsuta HOM05D007765 ORTHO05D009826 3.9e-14 82.4 176 32.4
PSO170G3972 Papaver somniferum HOM05D007765 ORTHO05D009826 1.5e-13 80.5 233 31.3
MBI16_g38085_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 1.6e-12 77.0 195 29.7
C03p88840 Brassica napus HOM05D007765 ORTHO05D009826 2.8e-12 76.3 174 31.0
BolC3t21196H Brassica oleracea HOM05D007765 ORTHO05D009826 2.8e-12 76.3 174 31.0
A08p19380 Brassica napus HOM05D007765 ORTHO05D009826 3.6e-12 75.9 174 31.0
BraA08t33899Z Brassica rapa HOM05D007765 ORTHO05D009826 3.6e-12 75.9 174 31.0
PSO063G6075 Papaver somniferum HOM05D007765 ORTHO05D009826 4.7e-12 75.5 233 30.9
CANSAT11G2643 Cannabis sativa HOM05D007765 ORTHO05D009826 2.6e-10 69.7 225 27.1
Medtr2g083470 Medicago truncatula HOM05D007765 ORTHO05D009826 3.7e-09 65.9 66 53.0
THA.LOC104803486 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 3.7e-09 65.9 178 30.9
BcaB03g16695 Brassica carinata HOM05D007765 ORTHO05D009826 2.0e-07 60.1 120 33.3
SEGI_40441 Sequoiadendron giganteum HOM05D007765 ORTHO05D009826 2.0e-07 60.1 222 24.8
ATR0580G339 Amborella trichopoda HOM05D007765 ORTHO05D009826 5.0e-06 55.5 81 42.0


User provided reference genes

Program Settings