Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g035140 Medicago truncatula HOM05D000045 ORTHO05D001346 8.5e-162 573.5 278 100.0
Psat5g135360 Pisum sativum HOM05D000045 ORTHO05D001346 7.4e-57 224.9 364 41.2
TPR.G11556 Trifolium pratense HOM05D000045 ORTHO05D001346 1.7e-53 213.8 173 64.7
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 2.5e-52 209.9 183 57.4
Medtr4g035820 Medicago truncatula HOM05D000045 ORTHO05D001346 2.6e-41 173.3 306 39.2
Psat4g220520 Pisum sativum HOM05D000045 ORTHO05D001346 3.6e-35 152.9 156 50.0
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 1.3e-32 144.4 387 31.3
Rhsim03G0163900 Rhododendron simsii HOM05D000045 ORTHO05D001346 1.8e-26 124.0 173 37.6
Rhsim13G0198400 Rhododendron simsii HOM05D000045 ORTHO05D001346 2.6e-25 120.2 515 22.7
Rhsim07G0128000 Rhododendron simsii HOM05D000045 ORTHO05D001346 5.7e-25 119.0 495 23.2
vmacro10160 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 2.2e-24 117.1 172 37.2
vmacro14187 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 9.2e-23 111.7 184 38.0
AUR62038319 Chenopodium quinoa HOM05D000045 ORTHO05D001346 1.6e-22 110.9 360 27.8
Rhsim12G0119800 Rhododendron simsii HOM05D000045 ORTHO05D001346 2.7e-22 110.2 180 35.0
COL.COLO4_25131 Corchorus olitorius HOM05D000045 ORTHO05D001346 1.7e-21 107.5 183 35.5
Ah.13g070170 Amaranthus hybridus HOM05D000045 ORTHO05D001346 6.6e-21 105.5 177 36.7
Psat3g126920 Pisum sativum HOM05D000045 ORTHO05D001346 6.6e-21 105.5 108 54.6
Psat4g144760 Pisum sativum HOM05D000045 ORTHO05D001346 6.6e-21 105.5 108 55.6
RhsimUnG0176500 Rhododendron simsii HOM05D000045 ORTHO05D001346 1.1e-20 104.8 181 37.6
ECA248G3957 Erigeron canadensis HOM05D000045 ORTHO05D001346 5.6e-20 102.4 186 37.1
Rhsim06G0233300 Rhododendron simsii HOM05D000045 ORTHO05D001346 5.6e-20 102.4 181 36.5
Rhsim08G0141700 Rhododendron simsii HOM05D000045 ORTHO05D001346 1.2e-19 101.3 522 23.2
EL10Ac1g01665 Beta vulgaris HOM05D000045 ORTHO05D001346 3.6e-19 99.8 174 39.1
EL10Ac3g05951 Beta vulgaris HOM05D000045 ORTHO05D001346 3.6e-19 99.8 177 39.0
Rhsim09G0162500 Rhododendron simsii HOM05D000292 ORTHO05D000172 1.0e-18 98.2 127 45.7
vmacro14141 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.0e-18 98.2 339 28.6
EL10Ac9g21943 Beta vulgaris HOM05D000045 ORTHO05D001346 1.4e-18 97.8 198 32.8
EL10Ac5g11772 Beta vulgaris HOM05D000045 ORTHO05D001346 3.1e-18 96.7 198 32.8
ECA234G2892 Erigeron canadensis HOM05D000045 ORTHO05D001346 3.1e-18 96.7 316 29.7
Aqoxy5G02070 Aquilegia oxysepala HOM05D000045 ORTHO05D001346 8.9e-18 95.1 107 49.5
AUR62019840 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.0e-17 94.0 307 30.3
EL10Ac7g17754 Beta vulgaris HOM05D000045 ORTHO05D001346 9.8e-17 91.7 170 36.5
TPR.G18322 Trifolium pratense HOM05D059828 ORTHO05D001346 1.7e-16 90.9 69 68.1
EL10Ac9g20729 Beta vulgaris HOM05D000045 ORTHO05D001346 6.4e-16 89.0 170 35.3
Ah.01g011330 Amaranthus hybridus HOM05D000045 ORTHO05D000067 8.3e-16 88.6 107 45.8
vmacro02238 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.1e-15 88.2 172 32.0
vmacro17038 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.1e-15 88.2 167 34.1
vmacro22692 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 4.1e-15 86.3 141 34.0
EL10Ac1g01564 Beta vulgaris HOM05D000045 ORTHO05D001346 1.6e-14 84.3 137 37.2
Ah.05g172400 Amaranthus hybridus HOM05D000045 ORTHO05D001346 2.7e-14 83.6 173 35.3
ECA238G0332 Erigeron canadensis HOM05D000045 ORTHO05D001346 2.7e-14 83.6 107 43.9
ECA247G0301 Erigeron canadensis HOM05D000045 ORTHO05D001346 2.7e-14 83.6 107 43.9
vmacro23348 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 3.5e-14 83.2 322 25.8
Ah.02g117190 Amaranthus hybridus HOM05D029157 ORTHO05D026464 1.0e-13 81.6 133 35.3
ECA232G2231 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.0e-13 81.6 107 43.0
EL10Ac9g20652 Beta vulgaris HOM05D000045 ORTHO05D001346 1.7e-13 80.9 139 39.6
Psat1g058000 Pisum sativum HOM05D000045 ORTHO05D001346 3.9e-13 79.7 107 47.7
EL10Ac5g12088 Beta vulgaris HOM05D000045 ORTHO05D001346 8.6e-13 78.6 107 43.0
Rhsim06G0231600 Rhododendron simsii HOM05D001081 ORTHO05D003320 1.5e-12 77.8 106 43.4
TPR.G30934 Trifolium pratense HOM05D000045 ORTHO05D001346 1.5e-12 77.8 93 45.2
Medtr6g014355 Medicago truncatula HOM05D000045 ORTHO05D001346 3.3e-12 76.6 186 32.8
Rhsim12G0082900 Rhododendron simsii HOM05D000045 ORTHO05D001346 2.8e-11 73.6 121 38.8
Atru.chr7.1192 Acer truncatum HOM05D000045 ORTHO05D001346 8.0e-11 72.0 95 44.2
TPR.G16986 Trifolium pratense HOM05D000045 ORTHO05D001346 1.8e-10 70.9 47 76.6
vmacro22722 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.3e-08 64.7 44 65.9
Medtr8g447350 Medicago truncatula HOM05D000045 ORTHO05D001346 1.7e-08 64.3 126 38.9
AUR62019401 Chenopodium quinoa HOM05D000045 ORTHO05D001346 1.9e-07 60.8 122 36.9
vmacro22840 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.9e-07 60.8 43 67.4
Ah.05g180110 Amaranthus hybridus HOM05D000045 ORTHO05D001346 2.4e-07 60.5 116 36.2
FvH4_4g19281 Fragaria vesca HOM05D000045 ORTHO05D001346 3.2e-07 60.1 167 31.1
Rhsim12G0119700 Rhododendron simsii HOM05D000045 ORTHO05D001346 3.2e-07 60.1 44 63.6
VMungo0540G0739 Vigna mungo HOM05D000045 ORTHO05D001346 7.1e-07 58.9 102 37.3
Rhsim01G0066200 Rhododendron simsii HOM05D000045 ORTHO05D001346 9.2e-07 58.5 150 32.0
Phvul.006G220900 Phaseolus vulgaris HOM05D000045 ORTHO05D001346 1.2e-06 58.2 102 36.3
ClCG11G000450 Citrullus lanatus HOM05D000045 ORTHO05D001346 1.6e-06 57.8 104 35.6
MELO3C033452.2 Cucumis melo HOM05D000045 ORTHO05D001346 1.6e-06 57.8 104 35.6
TWI73G0746 Tripterygium wilfordii HOM05D000045 ORTHO05D001346 1.6e-06 57.8 103 36.9
AUR62032468 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.1e-06 57.4 108 38.0
Sed0027343 Sechium edule HOM05D000045 ORTHO05D001346 2.1e-06 57.4 104 35.6
CsaV3_5G014020 Cucumis sativus L. HOM05D000045 ORTHO05D001346 2.7e-06 57.0 104 35.6
CsaV3_UNG168310 Cucumis sativus L. HOM05D000045 ORTHO05D001346 2.7e-06 57.0 104 35.6
arahy.Tifrunner.gnm1.ann1.RBX3HB Arachis hypogaea HOM05D000045 ORTHO05D001346 3.5e-06 56.6 102 37.3
arahy.Tifrunner.gnm1.ann1.Z2KB3N Arachis hypogaea HOM05D000045 ORTHO05D001346 3.5e-06 56.6 102 37.3
MBI06_g32163_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 6.0e-06 55.8 108 34.3
Sabra01G0172600 Salix brachista HOM05D000045 ORTHO05D001346 6.0e-06 55.8 102 36.3
Ca_01880_v3 Cicer arietinum L. HOM05D000045 ORTHO05D001346 7.8e-06 55.5 109 33.9
Ca_01894_v3 Cicer arietinum L. HOM05D000045 ORTHO05D001346 7.8e-06 55.5 109 33.9
FvH4_5g27741 Fragaria vesca HOM05D000045 ORTHO05D001346 7.8e-06 55.5 102 36.3
Manes.10G110600 Manihot esculenta HOM05D000045 ORTHO05D001346 7.8e-06 55.5 102 37.3
Phvul.009G253800 Phaseolus vulgaris HOM05D000045 ORTHO05D001346 7.8e-06 55.5 107 35.5
Potri.004G227600 Populus trichocarpa HOM05D000045 ORTHO05D001346 7.8e-06 55.5 102 36.3
Prupe.1G583000 Prunus persica HOM05D000045 ORTHO05D001346 7.8e-06 55.5 102 36.3


User provided reference genes

Program Settings