Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g033740 Medicago truncatula HOM05D013061 ORTHO05D019266 3.1e-102 375.2 196 100.0
Medtr2g033720 Medicago truncatula HOM05D013061 ORTHO05D019266 7.5e-96 354.0 194 95.9
Psat1g162240 Pisum sativum HOM05D013061 ORTHO05D019266 9.9e-48 194.1 190 58.9
TPR.G33859 Trifolium pratense HOM05D013061 ORTHO05D019266 1.1e-43 180.6 193 52.3
Lalb_Chr15g0089141 Lupinus albus HOM05D013061 ORTHO05D019266 1.8e-33 146.7 196 46.4
TPR.G33856 Trifolium pratense HOM05D013061 ORTHO05D019266 1.5e-32 143.7 154 53.9
Lj6g0025245 Lotus japonicus HOM05D013061 ORTHO05D019266 6.0e-29 131.7 197 44.7
Medtr2g033670 Medicago truncatula HOM05D013061 ORTHO05D019266 3.9e-28 129.0 96 71.9
Glyma.17G035600 Glycine max HOM05D013061 ORTHO05D001207 3.2e-22 109.4 179 38.5
TPR.G25403 Trifolium pratense HOM05D013061 ORTHO05D001207 5.1e-20 102.1 188 37.8
Psat4g021840 Pisum sativum HOM05D013061 ORTHO05D001207 2.2e-18 96.7 182 36.8
Medtr4g122660 Medicago truncatula HOM05D001578 ORTHO05D001207 5.9e-16 88.6 187 33.7
Phvul.003G116500 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.5e-14 83.2 186 31.2
Ca_21426_v3 Cicer arietinum L. HOM05D013061 ORTHO05D001207 4.2e-14 82.4 135 38.5
Lj4g0008198 Lotus japonicus HOM05D013061 ORTHO05D001207 1.2e-13 80.9 190 34.2
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.8e-12 77.0 176 31.8
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.8e-12 77.0 176 31.8
Eucgr.H04067 Eucalyptus grandis HOM05D001578 ORTHO05D001207 2.3e-12 76.6 153 32.0
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.0e-12 76.3 183 31.1
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.0e-11 73.6 182 31.3
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 2.0e-11 73.6 181 32.0
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 2.0e-11 73.6 175 30.9
Ciclev10006032m.g Citrus clementina HOM05D001578 ORTHO05D001207 3.3e-11 72.8 176 29.5
Sabra08G0077500 Salix brachista HOM05D001578 ORTHO05D001207 3.3e-11 72.8 179 30.7
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 1.3e-10 70.9 179 29.1
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 1.3e-10 70.9 180 27.8
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 2.2e-10 70.1 177 28.8
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 4.8e-10 68.9 183 29.0
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 4.8e-10 68.9 183 29.0
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 8.2e-10 68.2 177 29.4
Gorai.011G202200 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.4e-09 67.4 151 30.5
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 1.8e-09 67.0 179 30.2
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 1.8e-09 67.0 184 28.8
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.4e-09 66.6 183 29.5
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 2.4e-09 66.6 181 31.5
Gohir.A01G035200 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.1e-09 66.2 175 29.7
TWI09G1118 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 3.1e-09 66.2 179 30.7
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 6.9e-09 65.1 151 30.5
Gohir.A10G174100 Gossypium hirsutum HOM05D001578 ORTHO05D001207 9.1e-09 64.7 151 29.1
Gohir.D01G023565 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.2e-08 64.3 175 29.1
Gorai.002G031100 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.2e-08 64.3 175 29.1
Thecc.04G305000 Theobroma cacao HOM05D001578 ORTHO05D001207 1.2e-08 64.3 182 29.7
Gohir.D10G180700 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.5e-08 63.9 182 28.6
Sabra08G0077400 Salix brachista HOM05D001578 ORTHO05D001207 1.5e-08 63.9 180 29.4
Gohir.A10G174050 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.0e-08 63.5 176 29.5
MD16G1150200 Malus domestica HOM05D001578 ORTHO05D001207 2.0e-08 63.5 179 29.1
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 2.6e-08 63.2 151 29.8
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 3.4e-08 62.8 174 30.5
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 3.4e-08 62.8 151 27.2
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 4.5e-08 62.4 175 28.6
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 5.9e-08 62.0 151 29.1
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 5.9e-08 62.0 183 30.1
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 5.9e-08 62.0 182 28.0
CSS0037733 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 7.7e-08 61.6 119 29.4
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 7.7e-08 61.6 169 26.0
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 7.7e-08 61.6 151 29.1
Potri.008G102600 Populus trichocarpa HOM05D001578 ORTHO05D001207 7.7e-08 61.6 180 28.9
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 1.0e-07 61.2 181 28.7
Psat0s740g0040 Pisum sativum HOM05D001578 ORTHO05D001207 1.3e-07 60.8 151 28.5
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 1.3e-07 60.8 151 30.5
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 1.7e-07 60.5 185 28.6
Manes.15G002000 Manihot esculenta HOM05D001578 ORTHO05D001207 1.7e-07 60.5 180 29.4
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 2.2e-07 60.1 117 30.8
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 2.2e-07 60.1 117 30.8
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 2.2e-07 60.1 170 28.2
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.9e-07 59.7 183 29.5
Duzib052G0195 Durio zibethinus HOM05D001578 ORTHO05D001207 3.8e-07 59.3 183 28.4
TPR.G25397 Trifolium pratense HOM05D001578 ORTHO05D001207 3.8e-07 59.3 156 28.8
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 5.0e-07 58.9 178 26.4
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 5.0e-07 58.9 178 26.4
Lalb_Chr07g0181931 Lupinus albus HOM05D001578 ORTHO05D001207 6.5e-07 58.5 181 27.6
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 6.5e-07 58.5 151 25.2
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 6.5e-07 58.5 178 26.4
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 8.5e-07 58.2 177 26.0
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 1.4e-06 57.4 185 25.4
Glyma.07G237300 Glycine max HOM05D001578 ORTHO05D001207 1.9e-06 57.0 183 27.9
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 1.9e-06 57.0 180 30.0
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 1.9e-06 57.0 180 28.9
Manes.10G035400 Manihot esculenta HOM05D004113 ORTHO05D005233 2.5e-06 56.6 151 25.8
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 4.2e-06 55.8 174 28.2
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 5.5e-06 55.5 185 28.6
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 5.5e-06 55.5 173 24.9
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 7.2e-06 55.1 174 28.2
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 7.2e-06 55.1 190 28.4
Rhsim13G0002900 Rhododendron simsii HOM05D001578 ORTHO05D001207 9.4e-06 54.7 147 29.3


User provided reference genes

Program Settings