Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g032920 Medicago truncatula HOM05D008175 ORTHO05D010403 1.1e-206 723.0 358 100.0
Medtr3g009910 Medicago truncatula HOM05D008175 ORTHO05D010403 4.5e-107 392.1 388 54.9
Medtr7g095350 Medicago truncatula HOM05D008175 ORTHO05D010403 8.5e-106 387.9 385 54.0
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 2.6e-102 376.3 386 51.8
TPR.G24323 Trifolium pratense HOM05D008175 ORTHO05D010403 2.0e-99 366.7 391 54.0
Medtr6g013240 Medicago truncatula HOM05D008175 ORTHO05D010403 8.6e-98 361.3 390 53.8
Medtr6g013380 Medicago truncatula HOM05D008175 ORTHO05D010403 8.6e-98 361.3 390 53.8
Medtr7g092650 Medicago truncatula HOM05D008175 ORTHO05D010403 1.8e-92 343.6 379 53.0
Medtr7g089620 Medicago truncatula HOM05D008175 ORTHO05D010403 6.6e-90 335.1 398 52.3
Medtr7g089570 Medicago truncatula HOM05D008175 ORTHO05D010403 5.6e-81 305.4 393 49.4
Medtr7g089610 Medicago truncatula HOM05D008175 ORTHO05D010403 3.4e-78 296.2 398 48.7
Medtr7g087840 Medicago truncatula HOM05D008175 ORTHO05D010403 4.1e-76 289.3 391 46.8
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 3.1e-71 273.1 383 44.6
Medtr7g087040 Medicago truncatula HOM05D008175 ORTHO05D010403 2.9e-69 266.5 390 43.8
Medtr6g071510 Medicago truncatula HOM05D008175 ORTHO05D010403 1.6e-67 260.8 380 44.5
Medtr6g471290 Medicago truncatula HOM05D008175 ORTHO05D010403 2.1e-67 260.4 380 44.5
Psat0s1930g0040 Pisum sativum HOM05D008175 ORTHO05D010403 2.1e-67 260.4 355 45.9
Psat0s1584g0040 Pisum sativum HOM05D008175 ORTHO05D010403 3.6e-64 249.6 383 43.9
TPR.G4066 Trifolium pratense HOM05D008175 ORTHO05D010403 7.1e-60 235.3 352 44.0
Medtr7g105510 Medicago truncatula HOM05D008175 ORTHO05D010403 2.0e-54 217.2 263 52.1
TPR.G3860 Trifolium pratense HOM05D008175 ORTHO05D010403 7.1e-52 208.8 278 48.9
Medtr0176s0050 Medicago truncatula HOM05D008175 ORTHO05D010403 1.6e-51 207.6 313 42.8
TPR.G3814 Trifolium pratense HOM05D008175 ORTHO05D010403 2.1e-51 207.2 213 56.3
TPR.G20555 Trifolium pratense HOM05D008175 ORTHO05D010403 3.6e-48 196.4 235 50.6
Psat7g057400 Pisum sativum HOM05D008175 ORTHO05D010403 2.7e-43 180.3 384 35.4
Medtr6g471300 Medicago truncatula HOM05D008175 ORTHO05D010403 1.3e-42 177.9 217 49.8
Medtr7g095310 Medicago truncatula HOM05D008175 ORTHO05D010403 3.3e-41 173.3 232 50.0
Medtr7g105980 Medicago truncatula HOM05D008175 ORTHO05D010403 3.7e-40 169.9 183 51.9
TPR.G21834 Trifolium pratense HOM05D008175 ORTHO05D010403 1.4e-39 167.9 225 51.1
Psat1g038520 Pisum sativum HOM05D008175 ORTHO05D010403 1.9e-36 157.5 245 43.3
Medtr7g095340 Medicago truncatula HOM05D008175 ORTHO05D010403 6.2e-32 142.5 132 59.8
Medtr2g064400 Medicago truncatula HOM05D008175 ORTHO05D010403 9.0e-31 138.7 351 29.6
Psat5g038520 Pisum sativum HOM05D008175 ORTHO05D010403 2.6e-30 137.1 231 40.7
TPR.G29221 Trifolium pratense HOM05D008175 ORTHO05D010403 7.6e-30 135.6 126 58.7
Medtr7g095390 Medicago truncatula HOM05D008175 ORTHO05D010403 6.5e-29 132.5 117 60.7
Medtr5g024120 Medicago truncatula HOM05D008175 ORTHO05D010403 6.3e-24 115.9 120 55.8
Psat4g068680 Pisum sativum HOM05D008175 ORTHO05D010403 3.4e-22 110.2 208 39.9
Ca_01871_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 3.6e-19 100.1 163 42.3
TPR.G19102 Trifolium pratense HOM05D008175 ORTHO05D010403 8.8e-18 95.5 83 63.9
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 1.4e-15 88.2 215 32.1
Ca_26228_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 5.3e-15 86.3 150 39.3
Psat0s2128g0040 Pisum sativum HOM05D008175 ORTHO05D010403 1.2e-14 85.1 78 53.8
Ca_25084_v3 Cicer arietinum L. HOM05D009500 ORTHO05D010403 6.1e-11 72.8 226 29.6
Medtr7g116250 Medicago truncatula HOM05D008175 ORTHO05D000368 1.0e-10 72.0 159 34.0
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 1.4e-10 71.6 179 32.4
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 1.8e-10 71.2 186 30.1
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 5.1e-10 69.7 220 30.0
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 5.1e-10 69.7 223 30.5
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 1.1e-09 68.6 206 30.1
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 7.4e-09 65.9 309 26.5
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 3.7e-08 63.5 192 31.2
Psat3g003680 Pisum sativum HOM05D009500 ORTHO05D000368 3.1e-07 60.5 111 37.8
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 5.3e-07 59.7 192 28.6
TPR.G4804 Trifolium pratense HOM05D008175 ORTHO05D000368 5.3e-07 59.7 98 42.9
FAN10G2125 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.1e-07 58.9 80 42.5
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.5e-06 58.2 135 31.1
Rhsim13G0226200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.5e-06 57.0 134 32.8
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.5e-06 56.6 133 31.6


User provided reference genes

Program Settings