Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g032910 Medicago truncatula HOM05D000734 ORTHO05D002223 8.0e-29 129.8 68 100.0
Medtr7g069610 Medicago truncatula HOM05D000734 ORTHO05D002223 1.3e-18 95.9 53 94.3
Ca_07667_v3 Cicer arietinum L. HOM05D000734 ORTHO05D002223 8.5e-15 83.2 53 83.0
TPR.G21315 Trifolium pratense HOM05D000734 ORTHO05D002223 1.1e-14 82.8 53 79.2
Psat3g125600 Pisum sativum HOM05D000734 ORTHO05D002223 5.5e-14 80.5 53 77.4
Lalb_Chr01g0023201 Lupinus albus HOM05D000734 ORTHO05D002223 2.0e-11 72.0 53 73.6
Lalb_Chr03g0043391 Lupinus albus HOM05D000734 ORTHO05D002223 2.0e-11 72.0 53 71.7
Prupe.6G281800 Prunus persica HOM05D000734 ORTHO05D002223 2.6e-11 71.6 53 71.7
FvH4_6g11020 Fragaria vesca HOM05D000734 ORTHO05D002223 3.4e-11 71.2 51 74.5
FAN14G5513 Fragaria x ananassa HOM05D000734 ORTHO05D002223 3.4e-11 71.2 51 74.5
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 7.5e-11 70.1 53 71.7
RcHm_v2.0_Chr3g0462361 Rosa chinensis HOM05D000734 ORTHO05D002223 7.5e-11 70.1 51 72.5
Sed0015014 Sechium edule HOM05D000734 ORTHO05D002223 7.5e-11 70.1 51 70.6
MELO3C026009.2 Cucumis melo HOM05D000734 ORTHO05D002223 9.8e-11 69.7 51 72.5
CsaV3_4G026440 Cucumis sativus L. HOM05D000734 ORTHO05D002223 9.8e-11 69.7 51 72.5
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 9.8e-11 69.7 51 72.5
Cfa017163 Carpinus fangiana HOM05D000734 ORTHO05D002223 1.7e-10 68.9 53 66.0
Haze_21042 Corylus avellana HOM05D000734 ORTHO05D002223 1.7e-10 68.9 53 66.0
Glyma.07G153700 Glycine max HOM05D000734 ORTHO05D002223 1.7e-10 68.9 53 67.9
Phvul.008G095000 Phaseolus vulgaris HOM05D000734 ORTHO05D002223 1.7e-10 68.9 53 66.0
ClCG04G006840 Citrullus lanatus HOM05D000734 ORTHO05D002223 2.8e-10 68.2 48 72.9
Duzib106G1236 Durio zibethinus HOM05D000734 ORTHO05D002223 2.8e-10 68.2 53 67.9
MELO3C001657.2 Cucumis melo HOM05D000734 ORTHO05D002223 3.7e-10 67.8 50 72.0
MELO3C028118.2 Cucumis melo HOM05D000734 ORTHO05D002223 3.7e-10 67.8 50 72.0
Lj1g0013682 Lotus japonicus HOM05D000734 ORTHO05D002223 3.7e-10 67.8 52 69.2
PGR004G0145 Punica granatum HOM05D000734 ORTHO05D002223 6.3e-10 67.0 53 67.9
Lalb_Chr19g0124351 Lupinus albus HOM05D000734 ORTHO05D002223 8.3e-10 66.6 53 69.8
TWI74G0514 Tripterygium wilfordii HOM05D000734 ORTHO05D002223 8.3e-10 66.6 51 66.7
MD04G1162100 Malus domestica HOM05D000734 ORTHO05D002223 1.4e-09 65.9 53 67.9
VMungo1383G1002 Vigna mungo HOM05D000734 ORTHO05D002223 1.4e-09 65.9 53 66.0
Sed0018204 Sechium edule HOM05D000734 ORTHO05D002223 1.8e-09 65.5 50 64.0
Gohir.D04G133700 Gossypium hirsutum HOM05D000734 ORTHO05D002223 3.1e-09 64.7 51 66.7
GSVIVG01030331001 Vitis vinifera HOM05D000734 ORTHO05D002223 3.1e-09 64.7 51 64.7
Gohir.A04G094300 Gossypium hirsutum HOM05D000734 ORTHO05D002223 5.4e-09 63.9 51 66.7
Gorai.012G117500 Gossypium raimondii HOM05D000734 ORTHO05D002223 5.4e-09 63.9 51 66.7
Dinv28669 Davidia involucrata HOM05D000734 ORTHO05D002223 7.0e-09 63.5 53 58.5
Carub.0005s1813 Capsella rubella HOM05D000734 ORTHO05D002223 9.1e-09 63.2 53 66.0
Manes.09G108800 Manihot esculenta HOM05D000734 ORTHO05D002223 9.1e-09 63.2 51 62.7
Glyma.01G123300 Glycine max HOM05D000734 ORTHO05D002223 1.2e-08 62.8 53 58.5
Haze_24374 Corylus avellana HOM05D000734 ORTHO05D002223 1.6e-08 62.4 53 58.5
Glyma.03G051600 Glycine max HOM05D000734 ORTHO05D002223 2.0e-08 62.0 53 56.6
QL07p034427 Quercus lobata HOM05D000734 ORTHO05D002223 2.0e-08 62.0 51 64.7
MD12G1174600 Malus domestica HOM05D000734 ORTHO05D002223 2.7e-08 61.6 53 64.2
Thecc.05G010500 Theobroma cacao HOM05D000734 ORTHO05D002223 2.7e-08 61.6 53 64.2
Actinidia32627 Actinidia chinensis HOM05D000734 ORTHO05D002223 3.5e-08 61.2 53 62.3
Thhalv10010632m.g Eutrema salsugineum HOM05D000734 ORTHO05D002223 3.5e-08 61.2 53 62.3
Lalb_Chr10g0103501 Lupinus albus HOM05D000734 ORTHO05D002223 3.5e-08 61.2 53 56.6
CARHR161410 Cardamine hirsuta HOM05D000734 ORTHO05D002223 4.5e-08 60.8 53 62.3
CiPaw.09G212600 Carya illinoinensis HOM05D000734 ORTHO05D002223 4.5e-08 60.8 51 60.8
Sp5g10490 Schrenkiella parvula HOM05D000734 ORTHO05D002223 4.5e-08 60.8 53 62.3
GSVIVG01024693001 Vitis vinifera HOM05D000734 ORTHO05D002223 4.5e-08 60.8 53 58.5
CiPaw.10G159000 Carya illinoinensis HOM05D000734 ORTHO05D002223 5.9e-08 60.5 51 60.8
COL.COLO4_11086 Corchorus olitorius HOM05D000734 ORTHO05D002223 5.9e-08 60.5 51 60.8
AL5G32240 Arabidopsis lyrata HOM05D000734 ORTHO05D002223 7.7e-08 60.1 53 60.4
QL01p039232 Quercus lobata HOM05D000734 ORTHO05D002223 7.7e-08 60.1 53 56.6
AT3G51780 Arabidopsis thaliana HOM05D000734 ORTHO05D002223 1.0e-07 59.7 53 62.3
BcaB01g00419 Brassica carinata HOM05D000734 ORTHO05D002223 1.0e-07 59.7 53 58.5
Cfa011734 Carpinus fangiana HOM05D000734 ORTHO05D002223 1.0e-07 59.7 53 56.6
Gohir.A01G228500 Gossypium hirsutum HOM05D000734 ORTHO05D002223 1.0e-07 59.7 53 60.4
Thecc.09G353000 Theobroma cacao HOM05D000734 ORTHO05D002223 1.0e-07 59.7 53 56.6
BcaB01g00477 Brassica carinata HOM05D000734 ORTHO05D002223 1.3e-07 59.3 53 56.6
C08p27030 Brassica napus HOM05D000734 ORTHO05D002223 1.3e-07 59.3 53 56.6
BolC8t50318H Brassica oleracea HOM05D000734 ORTHO05D002223 1.3e-07 59.3 53 56.6
CANSAT35G1428 Cannabis sativa HOM05D000734 ORTHO05D002223 1.3e-07 59.3 51 66.7
Dinv09647 Davidia involucrata HOM05D000734 ORTHO05D002223 1.3e-07 59.3 53 54.7
Potri.001G279500 Populus trichocarpa HOM05D000734 ORTHO05D002223 1.3e-07 59.3 52 55.8
Sabra16G0117000 Salix brachista HOM05D002396 ORTHO05D002779 1.3e-07 59.3 53 56.6
Sc22g0002600 Simmondsia chinensis HOM05D000734 ORTHO05D002223 1.3e-07 59.3 53 60.4
TWI31G0046 Tripterygium wilfordii HOM05D000734 ORTHO05D002223 1.3e-07 59.3 52 59.6
A09p44950 Brassica napus HOM05D000734 ORTHO05D002223 1.7e-07 58.9 53 56.6
BraA09t39954Z Brassica rapa HOM05D000734 ORTHO05D002223 1.7e-07 58.9 53 56.6
TPR.G8211 Trifolium pratense HOM05D000734 ORTHO05D002223 1.7e-07 58.9 53 56.6
Phvul.010G073600 Phaseolus vulgaris HOM05D000734 ORTHO05D002223 2.3e-07 58.5 53 56.6
CSS0000044 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002223 2.9e-07 58.2 53 58.5
CSS0029714 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002223 2.9e-07 58.2 53 58.5
CSS0030278 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002223 2.9e-07 58.2 53 58.5
COL.COLO4_14492 Corchorus olitorius HOM05D000734 ORTHO05D002223 2.9e-07 58.2 51 60.8
Duzib093G0094 Durio zibethinus HOM05D000734 ORTHO05D002223 2.9e-07 58.2 53 62.3
Duzib150G0122 Durio zibethinus HOM05D000734 ORTHO05D002223 2.9e-07 58.2 53 54.7
Gohir.D09G162500 Gossypium hirsutum HOM05D000734 ORTHO05D002223 2.9e-07 58.2 51 62.7
Gorai.006G184200 Gossypium raimondii HOM05D000734 ORTHO05D002223 2.9e-07 58.2 51 62.7
Psat7g243240 Pisum sativum HOM05D000734 ORTHO05D002223 2.9e-07 58.2 53 54.7
Gohir.D01G218400 Gossypium hirsutum HOM05D000734 ORTHO05D002223 3.8e-07 57.8 53 58.5
Gorai.002G265100 Gossypium raimondii HOM05D000734 ORTHO05D002223 3.8e-07 57.8 53 58.5
MBI15_g28808_MAGBIO Magnolia biondii HOM05D000734 ORTHO05D002223 3.8e-07 57.8 51 58.8
Dinv08452 Davidia involucrata HOM05D000734 ORTHO05D002223 5.0e-07 57.4 51 60.8
THA.LOC104806612 Tarenaya hassleriana HOM05D000734 ORTHO05D002223 5.0e-07 57.4 51 56.9
BcaC06g33007 Brassica carinata HOM05D000734 ORTHO05D002223 6.6e-07 57.0 51 60.8
Atru.chr3.4163 Acer truncatum HOM05D000734 ORTHO05D002223 8.6e-07 56.6 55 56.4
Aa31sc655G10 Aethionema arabicum HOM05D000734 ORTHO05D002223 8.6e-07 56.6 53 54.7
Ciclev10012355m.g Citrus clementina HOM05D000734 ORTHO05D002223 8.6e-07 56.6 53 56.6
A03p48510 Brassica napus HOM05D000734 ORTHO05D002223 1.1e-06 56.2 51 60.8
BraA03t13956Z Brassica rapa HOM05D000734 ORTHO05D002223 1.1e-06 56.2 51 60.8
Eucgr.J01901 Eucalyptus grandis HOM05D000734 ORTHO05D002223 1.1e-06 56.2 51 58.8
Potri.009G074300 Populus trichocarpa HOM05D000734 ORTHO05D002223 1.1e-06 56.2 51 54.9
Atru.chr8.2289 Acer truncatum HOM05D000734 ORTHO05D002223 1.5e-06 55.8 53 58.5
Medtr4g017810 Medicago truncatula HOM05D000734 ORTHO05D002223 1.5e-06 55.8 53 54.7
Potri.016G121200 Populus trichocarpa HOM05D000734 ORTHO05D002223 1.5e-06 55.8 53 56.6
VMungo0647G2426 Vigna mungo HOM05D000734 ORTHO05D002223 1.5e-06 55.8 53 52.8
Cpa.g.sc120.29 Carica papaya HOM05D000734 ORTHO05D002223 1.9e-06 55.5 51 58.8
Sabra16G0173200 Salix brachista HOM05D000734 ORTHO05D002223 1.9e-06 55.5 52 53.8
CANSAT54G2474 Cannabis sativa HOM05D000734 ORTHO05D002223 2.5e-06 55.1 53 50.9
Cc01_g14550 Coffea canephora HOM05D000734 ORTHO05D002223 2.5e-06 55.1 51 54.9
Lj3g0023463 Lotus japonicus HOM05D000734 ORTHO05D002223 2.5e-06 55.1 53 52.8
Manes.18G141400 Manihot esculenta HOM05D000734 ORTHO05D002223 2.5e-06 55.1 53 56.6
Sabra09G0056400 Salix brachista HOM05D000734 ORTHO05D002223 2.5e-06 55.1 51 51.0
BcaC06g33350 Brassica carinata HOM05D000734 ORTHO05D002223 3.3e-06 54.7 51 58.8
C07p46600 Brassica napus HOM05D000734 ORTHO05D002223 3.3e-06 54.7 51 58.8
BolC7t45175H Brassica oleracea HOM05D000734 ORTHO05D002223 3.3e-06 54.7 51 58.8
Ca_20132_v3 Cicer arietinum L. HOM05D000734 ORTHO05D002223 3.3e-06 54.7 51 54.9
CAN.G243.36 Capsicum annuum HOM05D000734 ORTHO05D002223 5.5e-06 53.9 48 58.3
Gohir.D05G107800 Gossypium hirsutum HOM05D000734 ORTHO05D002223 5.5e-06 53.9 53 52.8
SEGI_21113 Sequoiadendron giganteum HOM05D000734 ORTHO05D002223 5.5e-06 53.9 51 52.9
Cpa.g.sc2.421 Carica papaya HOM05D000734 ORTHO05D002223 7.2e-06 53.5 53 49.1
CiPaw.14G056800 Carya illinoinensis HOM05D000734 ORTHO05D002223 7.2e-06 53.5 53 49.1
Gohir.A05G107600 Gossypium hirsutum HOM05D000734 ORTHO05D002223 7.2e-06 53.5 53 52.8
Gorai.009G111900 Gossypium raimondii HOM05D000734 ORTHO05D002223 7.2e-06 53.5 53 52.8
Lalb_Chr07g0191241 Lupinus albus HOM05D000734 ORTHO05D002223 7.2e-06 53.5 53 52.8
Rhsim13G0066900 Rhododendron simsii HOM05D000734 ORTHO05D002223 7.2e-06 53.5 53 54.7
TAR633G2349 Trochodendron aralioides HOM05D000734 ORTHO05D002223 9.5e-06 53.1 51 54.9


User provided reference genes

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