Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g030640 Medicago truncatula HOM05D000593 ORTHO05D004526 2.5e-26 121.3 60 100.0
Medtr5g006100 Medicago truncatula HOM05D003216 ORTHO05D004526 2.0e-23 111.7 59 94.9
Medtr3g077875 Medicago truncatula HOM05D007688 ORTHO05D004526 4.9e-22 107.1 59 89.8
Medtr5g071805 Medicago truncatula HOM05D003216 ORTHO05D004526 4.9e-22 107.1 56 92.9
Medtr1g080040 Medicago truncatula HOM05D000593 ORTHO05D004526 7.8e-20 99.8 57 84.2
Medtr7g034570 Medicago truncatula HOM05D007688 ORTHO05D004526 7.3e-18 93.2 59 76.3
Medtr3g087440 Medicago truncatula HOM05D007688 ORTHO05D004526 2.1e-17 91.7 55 81.8
Medtr1g043440 Medicago truncatula HOM05D000593 ORTHO05D004526 4.0e-16 87.4 59 71.2
Medtr4g120790 Medicago truncatula HOM05D000593 ORTHO05D004526 1.2e-15 85.9 59 71.2
Medtr0632s0010 Medicago truncatula HOM05D000593 ORTHO05D004526 5.8e-15 83.6 50 84.0
Medtr0156s0040 Medicago truncatula HOM05D000593 ORTHO05D004526 2.2e-14 81.6 56 73.2
Medtr4g051890 Medicago truncatula HOM05D007688 ORTHO05D004526 2.2e-14 81.6 56 69.6
Medtr8g028020 Medicago truncatula HOM05D000593 ORTHO05D004526 1.1e-13 79.3 59 69.5
Medtr8g037210 Medicago truncatula HOM05D000593 ORTHO05D004526 1.1e-13 79.3 53 71.7
Medtr4g100470 Medicago truncatula HOM05D000593 ORTHO05D004526 1.4e-13 79.0 59 64.4
Medtr2g027000 Medicago truncatula HOM05D007688 ORTHO05D004526 1.9e-13 78.6 59 62.7
Medtr4g066090 Medicago truncatula HOM05D007688 ORTHO05D004526 5.4e-13 77.0 59 67.8
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 7.8e-12 73.2 54 74.1
Medtr8g446840 Medicago truncatula HOM05D007688 ORTHO05D004526 3.9e-11 70.9 54 64.8
Medtr3g462670 Medicago truncatula HOM05D007688 ORTHO05D004526 1.9e-10 68.6 59 55.9
Medtr3g015530 Medicago truncatula HOM05D007688 ORTHO05D004526 2.5e-10 68.2 59 54.2
Medtr0599s0020 Medicago truncatula HOM05D007688 ORTHO05D004526 1.2e-09 65.9 50 62.0
Medtr3g034840 Medicago truncatula HOM05D007688 ORTHO05D004526 1.2e-09 65.9 50 62.0
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.6e-09 65.5 59 52.5
VMungo0331G0649 Vigna mungo HOM05D000593 ORTHO05D004526 1.6e-09 65.5 59 54.2
Ca_04248_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.8e-09 64.7 59 52.5
Ca_19793_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.8e-09 64.7 59 52.5
Medtr1g058140 Medicago truncatula HOM05D007688 ORTHO05D004526 4.7e-09 63.9 59 54.2
Medtr7g065910 Medicago truncatula HOM05D000593 ORTHO05D004526 4.7e-09 63.9 59 57.6
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 6.2e-09 63.5 59 52.5
Medtr7g010970 Medicago truncatula HOM05D000593 ORTHO05D004526 8.1e-09 63.2 51 62.7
Medtr2g026585 Medicago truncatula HOM05D007688 ORTHO05D004526 1.1e-08 62.8 59 50.8
Ca_14191_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.8e-08 62.0 59 49.2
Medtr5g046160 Medicago truncatula HOM05D000593 ORTHO05D004526 1.8e-08 62.0 59 59.3
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.8e-08 62.0 56 55.4
Medtr5g046245 Medicago truncatula HOM05D007688 ORTHO05D004526 2.3e-08 61.6 59 50.8
Oeu033650.1 Olea europaea HOM05D000593 ORTHO05D000562 2.3e-08 61.6 55 52.7
Ca_02614_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 5.2e-08 60.5 59 49.2
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 5.2e-08 60.5 55 50.9
Medtr7g106560 Medicago truncatula HOM05D007688 ORTHO05D004526 5.2e-08 60.5 56 53.6
TWI15G1013 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.2e-08 60.5 59 49.2
PSO832G1919 Papaver somniferum HOM05D000593 ORTHO05D000562 6.8e-08 60.1 55 45.5
Medtr2g023130 Medicago truncatula HOM05D000593 ORTHO05D000562 8.9e-08 59.7 56 51.8
PSO675G4622 Papaver somniferum HOM05D000593 ORTHO05D000562 8.9e-08 59.7 57 47.4
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 8.9e-08 59.7 59 47.5
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 1.2e-07 59.3 59 47.5
Medtr1g052890 Medicago truncatula HOM05D003216 ORTHO05D004526 2.0e-07 58.5 57 49.1
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 2.0e-07 58.5 59 47.5
PSO541G2752 Papaver somniferum HOM05D000593 ORTHO05D000562 2.0e-07 58.5 57 45.6
Hma1.2p1_1175F.1_g264110 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.6e-07 58.2 57 50.9
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 2.6e-07 58.2 56 42.9
Medtr2g461140 Medicago truncatula HOM05D000593 ORTHO05D004526 3.4e-07 57.8 55 43.6
Medtr4g057300 Medicago truncatula HOM05D000593 ORTHO05D004526 3.4e-07 57.8 50 56.0
Medtr5g060540 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-07 57.8 59 49.2
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 3.4e-07 57.8 59 44.1
PSO675G6516 Papaver somniferum HOM05D000593 ORTHO05D000562 3.4e-07 57.8 59 44.1
Medtr3g030230 Medicago truncatula HOM05D007688 ORTHO05D004526 4.4e-07 57.4 53 52.8
Medtr8g445570 Medicago truncatula HOM05D007688 ORTHO05D004526 4.4e-07 57.4 59 52.5
PSO541G4860 Papaver somniferum HOM05D000593 ORTHO05D000562 4.4e-07 57.4 58 44.8
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 5.8e-07 57.0 57 43.9
Medtr1g098990 Medicago truncatula HOM05D007688 ORTHO05D004526 5.8e-07 57.0 57 49.1
TWI56G0970 Tripterygium wilfordii HOM05D000593 ORTHO05D004526 5.8e-07 57.0 58 46.6
FvH4_6g12552 Fragaria vesca HOM05D000593 ORTHO05D000562 7.6e-07 56.6 57 43.9
Ca_22767_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 9.9e-07 56.2 59 44.1
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 9.9e-07 56.2 59 40.7
LjContig00564g0012597 Lotus japonicus HOM05D001013 ORTHO05D001703 9.9e-07 56.2 57 47.4
Medtr5g070810 Medicago truncatula HOM05D007688 ORTHO05D004526 9.9e-07 56.2 31 74.2
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.3e-06 55.8 59 40.7
Medtr2g067930 Medicago truncatula HOM05D007688 ORTHO05D004526 1.3e-06 55.8 56 50.0
Medtr5g031650 Medicago truncatula HOM05D007688 ORTHO05D004526 1.3e-06 55.8 51 52.9
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 1.3e-06 55.8 57 49.1
Medtr8g103800 Medicago truncatula HOM05D000593 ORTHO05D004526 1.3e-06 55.8 57 49.1
TWI34G1957 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-06 55.8 59 44.1
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.7e-06 55.5 57 43.9
Ca_04412_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.2e-06 55.1 59 45.8
Hma1.2p1_0627F.1_g191730 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.2e-06 55.1 57 45.6
Medtr3g067290 Medicago truncatula HOM05D007688 ORTHO05D004526 2.9e-06 54.7 57 47.4
Medtr3g467720 Medicago truncatula HOM05D007688 ORTHO05D004526 2.9e-06 54.7 57 47.4
Medtr8g107490 Medicago truncatula HOM05D000593 ORTHO05D004526 2.9e-06 54.7 51 52.9
TWI63G1156 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.9e-06 54.7 59 44.1
TWI77G0084 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.9e-06 54.7 59 42.4
Atru.chr2.270 Acer truncatum HOM05D000593 ORTHO05D000562 3.7e-06 54.3 57 43.9
Medtr4g119600 Medicago truncatula HOM05D007688 ORTHO05D004526 3.7e-06 54.3 57 47.4
Medtr6g075990 Medicago truncatula HOM05D007688 ORTHO05D004526 3.7e-06 54.3 57 47.4
Oeu017872.1 Olea europaea HOM05D000593 ORTHO05D000562 3.7e-06 54.3 55 47.3
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.9e-06 53.9 57 43.9
PSO832G2496 Papaver somniferum HOM05D000593 ORTHO05D000562 4.9e-06 53.9 55 40.0
PSO386G0280 Papaver somniferum HOM05D000593 ORTHO05D000562 6.4e-06 53.5 51 49.0
Medtr1g081740 Medicago truncatula HOM05D007688 ORTHO05D004526 8.4e-06 53.1 50 48.0
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 8.4e-06 53.1 47 53.2
TPR.G22274 Trifolium pratense HOM05D003216 ORTHO05D004526 8.4e-06 53.1 53 43.4


User provided reference genes

Program Settings